RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 TAF1DQ9H5J8 278 aaPredicted RBP4.91□□□□□ -1.62
GPCPD1-202ENST00000418646 VCPKMTQ9H867 229 aa4.91□□□□□ -1.62
GPCPD1-202ENST00000418646 C6orf50Q9HD87 102 aa4.91□□□□□ -1.62
GPCPD1-202ENST00000418646 TYW1Q9NV66 732 aaKnown RBP4.91□□□□□ -1.62
GPCPD1-202ENST00000418646 CNOT8Q9UFF9 292 aaKnown RBP4.91□□□□□ -1.62
GPCPD1-202ENST00000418646 PUF60Q9UHX1 559 aaKnown RBP4.91□□□□□ -1.62
GPCPD1-202ENST00000418646 ADAMTS5Q9UNA0 930 aa4.91□□□□□ -1.62
GPCPD1-202ENST00000418646 POTEMA6NI47 508 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 UNCXA6NJT0 531 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 HMGB1P1B2RPK0 211 aaPredicted RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 CCDC188H7C350 402 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 RAD51CO43502 376 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 EIF3JO75822 258 aaKnown RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 DNAJC8O75937 253 aaPredicted RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 FAM107AO95990 144 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 VIL1P09327 827 aaKnown RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 CARSP49589 748 aaKnown RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 RIPK1Q13546 671 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 TRADDQ15628 312 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 MAP9Q49MG5 647 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 ANKS4BQ8N8V4 417 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 AFAP1L1Q8TED9 768 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 RIN2Q8WYP3 895 aaPredicted RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 ATP6V1G3Q96LB4 118 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 ARID3AQ99856 593 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 IFIH1Q9BYX4 1025 aaKnown RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 OSBPL7Q9BZF2 842 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 LGALS13Q9UHV8 139 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 A0A087WUV0 522 aaPredicted RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 POTEFA5A3E0 1075 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 IL1BP01584 269 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 CYP1A2P05177 515 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 POTEIP0CG38 1075 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 POTEJP0CG39 1038 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 AMPD3Q01432 767 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 CTTNQ14247 550 aaKnown RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 HSP90AA4PQ58FG1 418 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 NAA35Q5VZE5 725 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 CDC42EP5Q6NZY7 148 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 USP17L2Q6R6M4 530 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 POTEEQ6S8J3 1075 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 ZNF804AQ7Z570 1209 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 TADA2BQ86TJ2 420 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 HOMER1Q86YM7 354 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 NLRP3Q96P20 1036 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 NTPCRQ9BSD7 190 aaKnown RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 NOC4LQ9BVI4 516 aaKnown RBP4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 SEL1LQ9UBV2 794 aa4.9□□□□□ -1.62
GPCPD1-202ENST00000418646 TRIP11Q15643 1979 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 MINDY4BA8MYZ0 360 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 EYA4O95677 639 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 DRD4P21917 467 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 GCAP28676 217 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 LSP1P33241 339 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 FLT3P36888 993 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 HSD17B3P37058 310 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 PTGER2P43116 358 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 TBC1D8BQ0IIM8 1120 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 CALCRLQ16602 461 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 KNOP1Q1ED39 458 aaKnown RBP4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 FKBP1CQ5VVH2 108 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 CGB2Q6NT52 195 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 SV2BQ7L1I2 683 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 OGFOD1Q8N543 542 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 MYCBPAPQ8TBZ2 947 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 MZB1Q8WU39 189 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 P3H4Q92791 437 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 ART4Q93070 314 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 NUP88Q99567 741 aaPredicted RBP4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 JPH2Q9BR39 696 aaPredicted RBP4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 DHRS4Q9BTZ2 278 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 MCM9Q9NXL9 1143 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 GTF2IRD1Q9UHL9 959 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 DBR1Q9UK59 544 aaKnown RBP4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 ODF2LQ9ULJ1 636 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 AFF2P51816 1311 aa4.9□□□□□ -1.63
GPCPD1-202ENST00000418646 KIAA0391O15091 583 aaKnown RBP4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 MSH4O15457 936 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 CCNT1O60563 726 aaKnown RBP4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 SLITRK3O94933 977 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 ATP2B1P20020 1258 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 CTNNA1P35221 906 aaKnown RBP4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 TECP42680 631 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 ADCY7P51828 1080 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 CYP27A1Q02318 531 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 ACTN3Q08043 901 aaPredicted RBP4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 SPP2Q13103 211 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 BIRC3Q13489 604 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 TPTE2Q6XPS3 522 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 SLFN12Q8IYM2 578 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 MYOCDQ8IZQ8 938 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 METTL13Q8N6R0 699 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 REPS2Q8NFH8 660 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 NUP133Q8WUM0 1156 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 RNPC3Q96LT9 517 aaKnown RBP4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.89□□□□□ -1.635e-8■□□□□ 10.7
GPCPD1-202ENST00000418646 RASSF4Q9H2L5 321 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 GEMIN8Q9NWZ8 242 aaKnown RBP4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 EHD2Q9NZN4 543 aa4.89□□□□□ -1.63
GPCPD1-202ENST00000418646 SERPINA10Q9UK55 444 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms