RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 SMARCAD1Q9H4L7 1026 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 AZI2Q9H6S1 392 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 TMEM206Q9H813 350 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 IMPACTQ9P2X3 320 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 GABBR1Q9UBS5 961 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 CPA4Q9UI42 421 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 TRAF3IP3Q9Y228 551 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 SRCAPQ6ZRS2 3230 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 SYNRGQ9UMZ2 1314 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 DDX39AO00148 427 aaKnown RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 PEX10O60683 326 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 FAM13AO94988 1023 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 ADCY5O95622 1261 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 GGPS1O95749 300 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 SNAI1O95863 264 aaPredicted RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 PLS3P13797 630 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 CDK11BP21127 795 aaKnown RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 HOXD10P28358 340 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 CASP1P29466 404 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 SMTNP53814 917 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 NKX3-2P78367 333 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 FKBP3Q00688 224 aaKnown RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 CRHR2Q13324 411 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 TPD52L1Q16890 204 aaPredicted RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 FILIP1LQ4L180 1135 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 TTI2Q6NXR4 508 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 ANO5Q75V66 913 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 ZNF720Q7Z2F6 126 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 ZC3H3Q8IXZ2 948 aaKnown RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 KIAA0895Q8NCT3 520 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 PIGOQ8TEQ8 1089 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 ZFP91Q96JP5 570 aaPredicted RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 CCDC43Q96MW1 224 aaKnown RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 APBA2Q99767 749 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 STRA6Q9BX79 667 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 TRIM5Q9C035 493 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 HSD3B7Q9H2F3 369 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 FANCLQ9NW38 375 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 WRAP73Q9P2S5 460 aaPredicted RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 LIMA1Q9UHB6 759 aaKnown RBP11.19□□□□□ -0.62
HMGA1P6-201ENST00000418454 LCTP09848 1927 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 NOP56O00567 594 aaKnown RBP11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 CALUO43852 315 aaPredicted RBP11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 KPNA6O60684 536 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 OATP04181 439 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 YY1P25490 414 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 RPL13P26373 211 aaKnown RBP11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 ZNF75DP51815 510 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 PRMT2P55345 433 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 MARSP56192 900 aaKnown RBP11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 MCCD1P59942 119 aaPredicted RBP11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 FANCCQ00597 558 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 PPP2R3AQ06190 1150 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 POU5F1BQ06416 359 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 ENPEPQ07075 957 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 KIF22Q14807 665 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 TARBP2Q15633 366 aaKnown RBP11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 KNOP1Q1ED39 458 aaKnown RBP11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 FILIP1Q7Z7B0 1213 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 IQCDQ96DY2 449 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 CAPNS2Q96L46 248 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 MED15Q96RN5 788 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 R3HDMLQ9H3Y0 253 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 CYP26B1Q9NR63 512 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 ERAP1Q9NZ08 941 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 GDAQ9Y2T3 454 aa11.18□□□□□ -0.62
HMGA1P6-201ENST00000418454 COL1A2P08123 1366 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 TNPO2O14787 897 aaKnown RBP11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 BACH1O14867 736 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 ASAP2O43150 1006 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 ZNF862O60290 1169 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 HBP1O60381 514 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 SERPINC1P01008 464 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 TPM2P07951 284 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 TCF7P36402 384 aaPredicted RBP11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 UBASH3AP57075 661 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 LACTBP83111 547 aaPredicted RBP11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 GTF2BQ00403 316 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 CDC42EP1Q00587 391 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 ARHGAP1Q07960 439 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 NR1I3Q14994 352 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 PPP2R5AQ15172 486 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 LY6KQ17RY6 165 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 ZCWPW2Q504Y3 356 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 BRDTQ58F21 947 aaPredicted RBP11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 XKR9Q5GH70 373 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 ZNF484Q5JVG2 852 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 CYP4F22Q6NT55 531 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 SLC9A9Q8IVB4 645 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 CCDC60Q8IWA6 550 aaPredicted RBP11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 FAM178BQ8IXR5 827 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 MYCT1Q8N699 235 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 CSGALNACT2Q8N6G5 542 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 ATP8B4Q8TF62 1192 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 SCFD1Q8WVM8 642 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 TCP11Q8WWU5 503 aa11.17□□□□□ -0.62
HMGA1P6-201ENST00000418454 CEP170P1Q96L14 293 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms