RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 BACH2Q9BYV9 841 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 IFIH1Q9BYX4 1025 aaKnown RBP23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 CDHR5Q9HBB8 845 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 WRAP73Q9P2S5 460 aaPredicted RBP23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 SAMM50Q9Y512 469 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 TRANK1O15050 2925 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 UNC80Q8N2C7 3258 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 KIF28PB7ZC32 967 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 HMGN5P82970 282 aaKnown RBP23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 TMEM62Q0P6H9 643 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 TSHZ1Q6ZSZ6 1077 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 MIER3Q7Z3K6 550 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 RSPH3Q86UC2 560 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 NME8Q8N427 588 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 TMEM40Q8WWA1 233 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 LINC01599Q8WXQ3 324 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 TMX3Q96JJ7 454 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 MTMR9Q96QG7 549 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 NAP1L4Q99733 375 aaKnown RBP23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 TRPV2Q9Y5S1 764 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 SQORQ9Y6N5 450 aa23.24■■□□□ 1.31
PKNOX1-202ENST00000418336 TMEM150BA6NC51 233 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 EPOPA6NHQ4 379 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 RPLP2P05387 115 aaKnown RBP23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 KCNJ6P48051 423 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 ADGRE1Q14246 886 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 CRIPAKQ8N1N5 446 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 IL27Q8NEV9 243 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 APBB2Q92870 758 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 C8orf76Q96K31 380 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 FAM167AQ96KS9 214 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 NIFKQ9BYG3 293 aaKnown RBP23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 CELF4Q9BZC1 486 aaKnown RBP23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 BRMS1Q9HCU9 246 aa23.23■■□□□ 1.31
PKNOX1-202ENST00000418336 HTRA4P83105 476 aaPredicted RBP23.22■■□□□ 1.31
PKNOX1-202ENST00000418336 TAP1Q03518 808 aa23.22■■□□□ 1.31
PKNOX1-202ENST00000418336 RTN4RL1Q86UN2 441 aaPredicted RBP23.22■■□□□ 1.31
PKNOX1-202ENST00000418336 CKAP2LQ8IYA6 745 aa23.22■■□□□ 1.31
PKNOX1-202ENST00000418336 PRDM12Q9H4Q4 367 aa23.22■■□□□ 1.31
PKNOX1-202ENST00000418336 SLC28A3Q9HAS3 691 aa23.22■■□□□ 1.31
PKNOX1-202ENST00000418336 TCEAL9Q9UHQ7 104 aa23.22■■□□□ 1.31
PKNOX1-202ENST00000418336 REV3LO60673 3130 aa23.22■■□□□ 1.31
PKNOX1-202ENST00000418336 IGKV6-21A0A0C4DH24 114 aa23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 GPR32O75388 356 aa23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 CD52P31358 61 aa23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 TRIM29Q14134 588 aa23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 IER5Q5VY09 327 aa23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 ANO5Q75V66 913 aa23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 TRMT1LQ7Z2T5 733 aaKnown RBP23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 BANK1Q8NDB2 785 aa23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 SP7Q8TDD2 431 aaPredicted RBP23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 TOP1MTQ969P6 601 aa23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 FOXP1Q9H334 677 aaPredicted RBP23.21■■□□□ 1.31
PKNOX1-202ENST00000418336 ST18O60284 1047 aa23.2■■□□□ 1.3
PKNOX1-202ENST00000418336 PPP2R2DQ66LE6 453 aa23.2■■□□□ 1.3
PKNOX1-202ENST00000418336 ADAMTS10Q9H324 1103 aa23.2■■□□□ 1.3
PKNOX1-202ENST00000418336 TMX1Q9H3N1 280 aa23.2■■□□□ 1.3
PKNOX1-202ENST00000418336 UPF2Q9HAU5 1272 aaKnown RBP23.2■■□□□ 1.3
PKNOX1-202ENST00000418336 RC3H2Q9HBD1 1191 aaKnown RBP23.2■■□□□ 1.3
PKNOX1-202ENST00000418336 CEP131Q9UPN4 1083 aa23.2■■□□□ 1.3
PKNOX1-202ENST00000418336 TTC3P53804 2025 aa23.2■■□□□ 1.3
PKNOX1-202ENST00000418336 MYO9BQ13459 2157 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 ENPP3O14638 875 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 TLL1O43897 1013 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 U2AF2P26368 475 aaKnown RBP eCLIP23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 CLCN3P51790 818 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 PSMC5P62195 406 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 XKR3Q5GH77 459 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 RAD9AQ99638 391 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 ERVK-5Q9HDB9 667 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 NRBP2Q9NSY0 501 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 PADI3Q9ULW8 664 aa23.19■■□□□ 1.3
PKNOX1-202ENST00000418336 MAGEB2O15479 319 aa23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 AMHP03971 560 aa23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 DRP2Q13474 957 aa23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 EPHA7Q15375 998 aa23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 SLFN12Q8IYM2 578 aa23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 LRRC71Q8N4P6 559 aa23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 ZNF579Q8NAF0 562 aaKnown RBP23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 USP38Q8NB14 1042 aa23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 SH2D3AQ9BRG2 576 aa23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 NOC2LQ9Y3T9 749 aaKnown RBP23.18■■□□□ 1.3
PKNOX1-202ENST00000418336 COL4A4P53420 1690 aaPredicted RBP23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 LINC01553A4QN01 128 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 VTNP04004 478 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 LINC00271P0C7V0 271 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 FOSL2P15408 326 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 EFCAB12Q6NXP0 572 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 FAM117BQ6P1L5 589 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 NOSTRINQ8IVI9 506 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 MYOCDQ8IZQ8 938 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 C4orf32Q8N8J7 132 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 HSD17B14Q9BPX1 270 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
PKNOX1-202ENST00000418336 MGEA5O60502 916 aa23.16■■□□□ 1.3
PKNOX1-202ENST00000418336 NEMFO60524 1076 aa23.16■■□□□ 1.3
PKNOX1-202ENST00000418336 P4HBP07237 508 aaKnown RBP23.16■■□□□ 1.3
PKNOX1-202ENST00000418336 QARSP47897 775 aaKnown RBP23.16■■□□□ 1.3
PKNOX1-202ENST00000418336 TOB1P50616 345 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms