RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 LRRD1A4D1F6 860 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 CLDN3O15551 220 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 ATF2P15336 505 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
BDNF-208ENST00000418212 PPP2R5EQ16537 467 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 SAMD7Q7Z3H4 446 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 CHP1Q99653 195 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
BDNF-208ENST00000418212 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
BDNF-208ENST00000418212 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.3□□□□□ -0.12
BDNF-208ENST00000418212 MAP2P11137 1827 aaKnown RBP14.3□□□□□ -0.12
BDNF-208ENST00000418212 PXDNQ92626 1479 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 SGK1O00141 431 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 GYS1P13807 737 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 GABPAQ06546 454 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 DNAJC24Q6P3W2 148 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 SMC1BQ8NDV3 1235 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 FAM193BQ96PV7 902 aaPredicted RBP14.29□□□□□ -0.12
BDNF-208ENST00000418212 HDAC6Q9UBN7 1215 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 POLLQ9UGP5 575 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 PRR12Q9ULL5 1215 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 ABT1Q9ULW3 272 aaKnown RBP14.29□□□□□ -0.12
BDNF-208ENST00000418212 CCDC151A5D8V7 595 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 P4HBP07237 508 aaKnown RBP14.29□□□□□ -0.12
BDNF-208ENST00000418212 BAATQ14032 418 aaPredicted RBP14.29□□□□□ -0.12
BDNF-208ENST00000418212 MAP7D1Q3KQU3 841 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 LMBRD2Q68DH5 695 aaPredicted RBP14.29□□□□□ -0.12
BDNF-208ENST00000418212 RAB3IL1Q8TBN0 382 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 PACSIN2Q9UNF0 486 aaPredicted RBP14.29□□□□□ -0.12
BDNF-208ENST00000418212 FAN1Q9Y2M0 1017 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 ADGRG1Q9Y653 693 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 RIMBP3CA6NJZ7 1639 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 RIMBP3BA6NNM3 1639 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 RIMBP3Q9UFD9 1639 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 CEP128Q6ZU80 1094 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 CATSPER4Q7RTX7 472 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 ADGRA1Q86SQ6 560 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 TBC1D31Q96DN5 1066 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 NGRNQ9NPE2 291 aaKnown RBP14.29□□□□□ -0.12
BDNF-208ENST00000418212 TBC1D22BQ9NU19 505 aa14.29□□□□□ -0.12
BDNF-208ENST00000418212 ZC3H13Q5T200 1668 aaKnown RBP14.28□□□□□ -0.12
BDNF-208ENST00000418212 PALMO75781 387 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 DHX9Q08211 1270 aaKnown RBP14.28□□□□□ -0.12
BDNF-208ENST00000418212 CDO1Q16878 200 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 OR6B2Q6IFH4 312 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 HAUS1Q96CS2 278 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 CCSER1Q9C0I3 900 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 GPR75-ASB3A0A0A6YYF3 556 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 FGGP02679 453 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 YWHAGP61981 247 aaKnown RBP eCLIP14.28□□□□□ -0.12
BDNF-208ENST00000418212 KIF22Q14807 665 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 MAPK6Q16659 721 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 LGSNQ5TDP6 509 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 MCPH1Q8NEM0 835 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 HOMER3Q9NSC5 361 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 CNTNAP5Q8WYK1 1306 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 SALL3Q9BXA9 1300 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 USP11P51784 963 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 C16orf86Q6ZW13 317 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 CCNYQ8ND76 341 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 SLC17A8Q8NDX2 589 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 TBK1Q9UHD2 729 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 SUGT1Q9Y2Z0 365 aa14.28□□□□□ -0.12
BDNF-208ENST00000418212 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
BDNF-208ENST00000418212 PSMD14O00487 310 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 KRT76Q01546 638 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 ITKQ08881 620 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 ANKRD20A3Q5VUR7 823 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 CCDC13Q8IYE1 715 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 NSMCE1Q8WV22 266 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 ABCB6Q9NP58 842 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 ESYT3A0FGR9 886 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 NCK2O43639 380 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 LIG3P49916 1009 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 CROCCP2Q86T23 111 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 ABI1Q8IZP0 508 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 HEMGNQ9BXL5 484 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 CAPS2Q9BXY5 557 aa14.27□□□□□ -0.12
BDNF-208ENST00000418212 DIP2BQ9P265 1576 aa14.27□□□□□ -0.13
BDNF-208ENST00000418212 FXR1P51114 621 aaKnown RBP eCLIP14.27□□□□□ -0.13
BDNF-208ENST00000418212 TMEM270Q6UE05 265 aa14.27□□□□□ -0.13
BDNF-208ENST00000418212 RFX6Q8HWS3 928 aa14.27□□□□□ -0.13
BDNF-208ENST00000418212 GLYCTKQ8IVS8 523 aa14.27□□□□□ -0.13
BDNF-208ENST00000418212 ARHGEF2Q92974 986 aaKnown RBP14.27□□□□□ -0.13
BDNF-208ENST00000418212 HEXIM2Q96MH2 286 aaKnown RBP14.27□□□□□ -0.13
BDNF-208ENST00000418212 JMJD4Q9H9V9 463 aa14.27□□□□□ -0.13
BDNF-208ENST00000418212 RPF1Q9H9Y2 349 aaKnown RBP14.27□□□□□ -0.13
BDNF-208ENST00000418212 NFU1Q9UMS0 254 aa14.27□□□□□ -0.13
BDNF-208ENST00000418212 CNTNAP4Q9C0A0 1308 aa14.27□□□□□ -0.13
BDNF-208ENST00000418212 MYMKA6NI61 221 aa14.26□□□□□ -0.13
BDNF-208ENST00000418212 A6NJR5 290 aa14.26□□□□□ -0.13
BDNF-208ENST00000418212 STXBP3O00186 592 aa14.26□□□□□ -0.13
BDNF-208ENST00000418212 ZNF211Q13398 564 aaPredicted RBP14.26□□□□□ -0.13
BDNF-208ENST00000418212 ZKSCAN8Q15776 578 aaPredicted RBP14.26□□□□□ -0.13
BDNF-208ENST00000418212 HAUS6Q7Z4H7 955 aa14.26□□□□□ -0.13
BDNF-208ENST00000418212 PRMT6Q96LA8 375 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms