RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ZNF827Q17R98 1081 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 SPATS1Q496A3 300 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 FAM209AQ5JX71 171 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 PRR31Q5SQ13 230 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 SCUBE1Q8IWY4 988 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZNF669Q96BR6 464 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 WRNIP1Q96S55 665 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 FTSJ1Q9UET6 329 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 MSRB2Q9Y3D2 182 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 PIK3C2GO75747 1445 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 MYOM1P52179 1685 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZNF142P52746 1687 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 ANP32CO43423 234 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 DIAPH1O60610 1272 aaKnown RBP5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 FBXO21O94952 628 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 SUMO1P63165 101 aaKnown RBP5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 PAK1Q13153 545 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 PAN2Q504Q3 1202 aaKnown RBP5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 NBPF6Q5VWK0 638 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 EP400NLQ6ZTU2 488 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 TTLL11Q8NHH1 800 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 UHMK1Q8TAS1 419 aaKnown RBP5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 LOXL4Q96JB6 756 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 NBPF4Q96M43 638 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 CD244Q9BZW8 370 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 CCDC113Q9H0I3 377 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 CATSPERZQ9NTU4 200 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 SLC52A1Q9NWF4 448 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 SIRPGQ9P1W8 387 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 WASF3Q9UPY6 502 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 SETD1AO15047 1707 aaKnown RBP5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 KNDC1Q76NI1 1749 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 RPGRIP1LQ68CZ1 1315 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 TNRQ92752 1358 aa5.13□□□□□ -1.59
HMGB3P20-201ENST00000417997 ADAMTSL3P82987 1691 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 AQP7O14520 342 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 ADCY3O60266 1144 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 CKMP06732 381 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 ADRB1P08588 477 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 FAM153BP0C7A2 387 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 SRGAP2CP0DJJ0 459 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 FAHP16930 419 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 GUCY1A3Q02108 690 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 FOXB2Q5VYV0 432 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZBTB38Q8NAP3 1195 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZCCHC14Q8WYQ9 949 aaKnown RBP5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 JADE2Q9NQC1 790 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZDHHC9Q9Y397 364 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 PCDHA8Q9Y5H6 950 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 KIF7Q2M1P5 1343 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 WASHC2AQ641Q2 1341 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 KDM2BQ8NHM5 1336 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZMYM3Q14202 1370 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 A2ML1A8K2U0 1454 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 NLRP1Q9C000 1473 aa5.12□□□□□ -1.59
HMGB3P20-201ENST00000417997 C9orf118A6NHY6 69 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 PLATP00750 562 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 ITGB3P05106 788 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 KRT15P19012 456 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 EFEMP1Q12805 493 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 SKIDA1Q1XH10 827 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 TBC1D10BQ4KMP7 808 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 GLB1LQ6UWU2 654 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 HHIPL2Q6UWX4 724 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 KCTD1Q719H9 257 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 MAMDC2Q7Z304 686 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 PLEKHH3Q7Z736 793 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 PTPRN2Q92932 1015 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 YTHDC1Q96MU7 727 aaKnown RBP5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 C8orf37Q96NL8 207 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 DEPDC7Q96QD5 511 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 GPR20Q99678 358 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 BARX1Q9HBU1 254 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 DLL4Q9NR61 685 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 SMPD4Q9NXE4 827 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 ARHGAP20Q9P2F6 1191 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZFP69BQ9UJL9 534 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 TELO2Q9Y4R8 837 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 ADGRF5Q8IZF2 1346 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 RIMS2Q9UQ26 1411 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 ASXL1Q8IXJ9 1541 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 ADGRB1O14514 1584 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 CEP170BQ9Y4F5 1589 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 ALKQ9UM73 1620 aa5.11□□□□□ -1.59
HMGB3P20-201ENST00000417997 ST20-MTHFSA0A0A6YYL1 179 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 B4GALT3O60512 393 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZFYVE9O95405 1425 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 ST5P78524 1137 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 TMF1P82094 1093 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 PFKPQ01813 784 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 IDI1Q13907 227 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 BTBD8Q5XKL5 378 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 DBX2Q6ZNG2 339 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 ARHGAP36Q6ZRI8 547 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 LIMS2Q7Z4I7 341 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 PROSER1Q86XN7 944 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 KBTBD2Q8IY47 623 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 STPG3Q8N7X2 389 aa5.1□□□□□ -1.59
HMGB3P20-201ENST00000417997 DTX3Q8N9I9 347 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms