RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 RBAK-RBAKDNI3L0D1 243 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 MAGEB2O15479 319 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 PPFIA3O75145 1194 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 DGKIO75912 1065 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 BMPR1AP36894 532 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 KCNQ1P51787 676 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 TMEM62Q0P6H9 643 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 TIGD5Q53EQ6 642 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 RTN4RL1Q86UN2 441 aaPredicted RBP20.85■□□□□ 0.93
VPS16-204ENST00000417508 NPAS4Q8IUM7 802 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 CLP1Q92989 425 aaKnown RBP20.85■□□□□ 0.93
VPS16-204ENST00000417508 RC3H2Q9HBD1 1191 aaKnown RBP20.85■□□□□ 0.93
VPS16-204ENST00000417508 NRBP2Q9NSY0 501 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 SAMM50Q9Y512 469 aa20.85■□□□□ 0.93
VPS16-204ENST00000417508 WDR81Q562E7 1941 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 ADGRA3Q8IWK6 1321 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 ZBTB42B2RXF5 422 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 SFNP31947 248 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 BTG3Q14201 252 aaPredicted RBP20.84■□□□□ 0.93
VPS16-204ENST00000417508 CRIPAKQ8N1N5 446 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 DAGLBQ8NCG7 672 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 C11orf84Q9BUA3 381 aaPredicted RBP20.84■□□□□ 0.93
VPS16-204ENST00000417508 UPF3BQ9BZI7 483 aaKnown RBP20.84■□□□□ 0.93
VPS16-204ENST00000417508 LMAN2LQ9H0V9 348 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 DISC1Q9NRI5 854 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 GABBR1Q9UBS5 961 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 MYO7AQ13402 2215 aa20.84■□□□□ 0.93
VPS16-204ENST00000417508 SPTBN5Q9NRC6 3674 aaKnown RBP20.83■□□□□ 0.93
VPS16-204ENST00000417508 CYP3A7-CYP3A51PA0A087WV96 503 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 GPR182O15218 404 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 MSH4O15457 936 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 EDIL3O43854 480 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 EIF5BO60841 1220 aaKnown RBP20.83■□□□□ 0.93
VPS16-204ENST00000417508 CDKL5O76039 1030 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 CYP3A7P24462 503 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 JAK3P52333 1124 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 Q4G0T1 1027 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 BLIDQ8IZY5 108 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 RDM1Q8NG50 284 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 TBCKQ8TEA7 893 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 SLC5A5Q92911 643 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 UIMC1Q96RL1 719 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 PLVAPQ9BX97 442 aa20.83■□□□□ 0.93
VPS16-204ENST00000417508 NCK2O43639 380 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 GAS7O60861 476 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 RPS6KA5O75582 802 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 C22orf31O95567 290 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 TMOD1P28289 359 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 CTNNB1P35222 781 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 CRYBB1P53674 252 aaPredicted RBP20.82■□□□□ 0.92
VPS16-204ENST00000417508 ANAPC15P60006 121 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 NFX1Q12986 1120 aaKnown RBP20.82■□□□□ 0.92
VPS16-204ENST00000417508 NAALADL2Q58DX5 795 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 MOXD1Q6UVY6 613 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 CMTR2Q8IYT2 770 aaKnown RBP20.82■□□□□ 0.92
VPS16-204ENST00000417508 BANK1Q8NDB2 785 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 LINC01599Q8WXQ3 324 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 TEKT3Q9BXF9 490 aa20.82■□□□□ 0.92
VPS16-204ENST00000417508 UBE2ZQ9H832 354 aaPredicted RBP20.82■□□□□ 0.92
VPS16-204ENST00000417508 M0R2N6 131 aa20.81■□□□□ 0.92
VPS16-204ENST00000417508 LINC00271P0C7V0 271 aa20.81■□□□□ 0.92
VPS16-204ENST00000417508 LEXMQ3ZCV2 418 aa20.81■□□□□ 0.92
VPS16-204ENST00000417508 LRCH2Q5VUJ6 765 aa20.81■□□□□ 0.92
VPS16-204ENST00000417508 SLKQ9H2G2 1235 aaPredicted RBP20.81■□□□□ 0.92
VPS16-204ENST00000417508 ERVK-5Q9HDB9 667 aa20.81■□□□□ 0.92
VPS16-204ENST00000417508 C1orf112Q9NSG2 853 aa20.81■□□□□ 0.92
VPS16-204ENST00000417508 LRFN2Q9ULH4 789 aa20.81■□□□□ 0.92
VPS16-204ENST00000417508 GINS2Q9Y248 185 aa20.81■□□□□ 0.92
VPS16-204ENST00000417508 REV3LO60673 3130 aa20.8■□□□□ 0.92
VPS16-204ENST00000417508 XBP1P17861 261 aa20.8■□□□□ 0.92
VPS16-204ENST00000417508 SARSP49591 514 aaKnown RBP20.8■□□□□ 0.92
VPS16-204ENST00000417508 STK3Q13188 491 aa20.8■□□□□ 0.92
VPS16-204ENST00000417508 ANKRD1Q15327 319 aa20.8■□□□□ 0.92
VPS16-204ENST00000417508 PUS10Q3MIT2 529 aaKnown RBP20.8■□□□□ 0.92
VPS16-204ENST00000417508 METTL13Q8N6R0 699 aa20.8■□□□□ 0.92
VPS16-204ENST00000417508 P2RX5Q93086 422 aa20.8■□□□□ 0.92
VPS16-204ENST00000417508 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
VPS16-204ENST00000417508 TMX1Q9H3N1 280 aa20.8■□□□□ 0.92
VPS16-204ENST00000417508 NSUN3Q9H649 340 aaKnown RBP20.8■□□□□ 0.92
VPS16-204ENST00000417508 CDHR5Q9HBB8 845 aa20.8■□□□□ 0.92
VPS16-204ENST00000417508 RGS18Q9NS28 235 aa20.8■□□□□ 0.92
VPS16-204ENST00000417508 NOC2LQ9Y3T9 749 aaKnown RBP20.8■□□□□ 0.92
VPS16-204ENST00000417508 PSMD10O75832 226 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 OATP04181 439 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 NONOQ15233 471 aaKnown RBP eCLIP20.79■□□□□ 0.92
VPS16-204ENST00000417508 TMEM266Q2M3C6 531 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 EFCAB12Q6NXP0 572 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 SLC24A5Q71RS6 500 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 KRT25Q7Z3Z0 450 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 MBOAT7Q96N66 472 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 MAP7D2Q96T17 732 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 ST3GAL5Q9UNP4 418 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 PCDHB7Q9Y5E2 793 aa20.79■□□□□ 0.92
VPS16-204ENST00000417508 DENND3A2RUS2 1198 aa20.78■□□□□ 0.92
VPS16-204ENST00000417508 ZNF862O60290 1169 aa20.78■□□□□ 0.92
VPS16-204ENST00000417508 PFKFB2O60825 505 aa20.78■□□□□ 0.92
VPS16-204ENST00000417508 GPR32O75388 356 aa20.78■□□□□ 0.92
VPS16-204ENST00000417508 NPY5RQ15761 445 aa20.78■□□□□ 0.92
VPS16-204ENST00000417508 TRMT1LQ7Z2T5 733 aaKnown RBP20.78■□□□□ 0.92
VPS16-204ENST00000417508 UNC45AQ9H3U1 944 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms