RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 FANCBQ8NB91 859 aa14.72□□□□□ -0.05
LINC00339-202ENST00000416769 EDAQ92838 391 aa14.72□□□□□ -0.05
LINC00339-202ENST00000416769 LZTS2Q9BRK4 669 aa14.72□□□□□ -0.05
LINC00339-202ENST00000416769 ANO3Q9BYT9 981 aa14.72□□□□□ -0.05
LINC00339-202ENST00000416769 ANO2Q9NQ90 1003 aa14.72□□□□□ -0.05
LINC00339-202ENST00000416769 BRPF3Q9ULD4 1205 aa14.72□□□□□ -0.05
LINC00339-202ENST00000416769 TMEM221A6NGB7 291 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 TBKBP1A7MCY6 615 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 LOC730098B7Z3J9 87 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 M0R296 226 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 SEC24BO95487 1268 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 KLRC1P26715 233 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 PBX3P40426 434 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 GNAQP50148 359 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 FUT2Q10981 343 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 CREB3L3Q68CJ9 461 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 KIAA0319LQ8IZA0 1049 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 ZNF668Q96K58 619 aaPredicted RBP14.71□□□□□ -0.05
LINC00339-202ENST00000416769 RPGRIP1Q96KN7 1286 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 UPF3BQ9BZI7 483 aaKnown RBP14.71□□□□□ -0.05
LINC00339-202ENST00000416769 AZI2Q9H6S1 392 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 SLC12A7Q9Y666 1083 aa14.71□□□□□ -0.05
LINC00339-202ENST00000416769 SMIM35A0A1B0GVV1 85 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 FAM86B1E9PN63 330 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 M0QZ92 97 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 FAM86B2P0C5J1 330 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 SARSP49591 514 aaKnown RBP14.7□□□□□ -0.06
LINC00339-202ENST00000416769 NAPAP54920 295 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 VCPP55072 806 aaKnown RBP14.7□□□□□ -0.06
LINC00339-202ENST00000416769 COASYQ13057 564 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 KIZQ2M2Z5 673 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 TRIM67Q6ZTA4 783 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 FAM228AQ86W67 206 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 FEZF2Q8TBJ5 459 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 TMEM87BQ96K49 555 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 POP1Q99575 1024 aaKnown RBP14.7□□□□□ -0.06
LINC00339-202ENST00000416769 OSMRQ99650 979 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 ADAM2Q99965 735 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 SDF4Q9BRK5 362 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 FTHL17Q9BXU8 183 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 RNF19AQ9NV58 838 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 FAM86C1Q9NVL1 165 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 LRFN2Q9ULH4 789 aa14.7□□□□□ -0.06
LINC00339-202ENST00000416769 NFASCO94856 1347 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 KDM3AQ9Y4C1 1321 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 IGKV6D-21A0A0A0MT36 114 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 C9IYK1 514 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 FGF18O76093 207 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 ATG7O95352 703 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 PDGFBP01127 241 aaPredicted RBP14.69□□□□□ -0.06
LINC00339-202ENST00000416769 VTNP04004 478 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 STAG3L1P0CL83 205 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 LIFRP42702 1097 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 ZXDAP98168 799 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 TCF15Q12870 199 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 NECTIN1Q15223 517 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 CEP55Q53EZ4 464 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 SPOUT1Q5T280 376 aaKnown RBP14.69□□□□□ -0.06
LINC00339-202ENST00000416769 ABHD15Q6UXT9 468 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 LRRC55Q6ZSA7 311 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 PLPPR4Q7Z2D5 763 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 COLGALT1Q8NBJ5 622 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 MICAL1Q8TDZ2 1067 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 ATP8B4Q8TF62 1192 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 PBXIP1Q96AQ6 731 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 CWH43Q9H720 699 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 TLE6Q9H808 572 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 RIC8AQ9NPQ8 531 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 TYW1Q9NV66 732 aaKnown RBP14.69□□□□□ -0.06
LINC00339-202ENST00000416769 ST3GAL5Q9UNP4 418 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 SQORQ9Y6N5 450 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 MYO10Q9HD67 2058 aa14.69□□□□□ -0.06
LINC00339-202ENST00000416769 WDR81Q562E7 1941 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 HIDE1A8MVS5 230 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 MEIS1O00470 390 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 BACH1O14867 736 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 FSCN2O14926 492 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 DHX15O43143 795 aaKnown RBP14.68□□□□□ -0.06
LINC00339-202ENST00000416769 RPS6KA5O75582 802 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 CBX2Q14781 532 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-202ENST00000416769 DUSP6Q16828 381 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 JAKMIP3Q5VZ66 844 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 PLPP4Q5VZY2 271 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 LLGL2Q6P1M3 1020 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 APOA5Q6Q788 366 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 SUSD6Q92537 303 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 MFSD14AQ96MC6 490 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 SMOC2Q9H3U7 446 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 TLR9Q9NR96 1032 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 FAM217BQ9NTX9 383 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-202ENST00000416769 PCDHB7Q9Y5E2 793 aa14.68□□□□□ -0.06
LINC00339-202ENST00000416769 V9GY48 417 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-202ENST00000416769 MYH9P35579 1960 aaKnown RBP14.67□□□□□ -0.06
LINC00339-202ENST00000416769 MAFGO15525 162 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 C22orf31O95567 290 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 CALM1P0DP23 149 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 CALM2P0DP24 149 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 CALM3P0DP25 149 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 CDC27P30260 824 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 SREBF1P36956 1147 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms