RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 IBSPP21815 317 aaPredicted RBP16.38■□□□□ 0.21
PAF1-202ENST00000416728 GNA11P29992 359 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 AKAP17AQ02040 695 aaKnown RBP16.38■□□□□ 0.21
PAF1-202ENST00000416728 CTC1Q2NKJ3 1217 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 ZNF484Q5JVG2 852 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 FAM43BQ6ZT52 329 aaPredicted RBP16.38■□□□□ 0.21
PAF1-202ENST00000416728 KIAA0319LQ8IZA0 1049 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 KCNB2Q92953 911 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 PPP2R3CQ969Q6 453 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 TMX1Q9H3N1 280 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 TTC3P53804 2025 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
PAF1-202ENST00000416728 LTBRP36941 435 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 SARSP49591 514 aaKnown RBP16.38■□□□□ 0.21
PAF1-202ENST00000416728 ODR4Q5SWX8 454 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 ZNF746Q6NUN9 644 aaPredicted RBP16.38■□□□□ 0.21
PAF1-202ENST00000416728 SMAP1Q8IYB5 467 aaPredicted RBP16.38■□□□□ 0.21
PAF1-202ENST00000416728 BBXQ8WY36 941 aaPredicted RBP16.38■□□□□ 0.21
PAF1-202ENST00000416728 ERVK-5Q9HDB9 667 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 PRKAG3Q9UGI9 489 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 PCDHB7Q9Y5E2 793 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 NLRC5Q86WI3 1866 aa16.38■□□□□ 0.21
PAF1-202ENST00000416728 NID2Q14112 1375 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 DENND3A2RUS2 1198 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 ZBTB42B2RXF5 422 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 ITGB1P05556 798 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 ALADP13716 330 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 ATP4AP20648 1035 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 HSPA4P34932 840 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 GATMP50440 423 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 ZP2Q05996 745 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 CAMK1Q14012 370 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 PKN1Q16512 942 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 PRR16Q569H4 304 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 TRMT1LQ7Z2T5 733 aaKnown RBP16.37■□□□□ 0.21
PAF1-202ENST00000416728 KLHL23Q8NBE8 558 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 TMEM40Q8WWA1 233 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 IGFLR1Q9H665 355 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 CDHR5Q9HBB8 845 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 C1orf112Q9NSG2 853 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 RNF216Q9NWF9 866 aaPredicted RBP16.37■□□□□ 0.21
PAF1-202ENST00000416728 NOC2LQ9Y3T9 749 aaKnown RBP16.37■□□□□ 0.21
PAF1-202ENST00000416728 SNX14Q9Y5W7 946 aa16.37■□□□□ 0.21
PAF1-202ENST00000416728 ADAMTS3O15072 1205 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 GPR182O15218 404 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 MGEA5O60502 916 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 C22orf31O95567 290 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 PSAPP07602 524 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.21
PAF1-202ENST00000416728 DLX2Q07687 328 aaPredicted RBP16.36■□□□□ 0.21
PAF1-202ENST00000416728 CLUL1Q15846 466 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 KIZQ2M2Z5 673 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 ADHFE1Q8IWW8 467 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 METTL13Q8N6R0 699 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 CCDC148Q8NFR7 591 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 SPPL3Q8TCT6 385 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 BICD2Q8TD16 824 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 PHKBQ93100 1093 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 PPP1R16BQ96T49 567 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 ADAM2Q99965 735 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 ST3GAL5Q9UNP4 418 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 CEP131Q9UPN4 1083 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 ARIH1Q9Y4X5 557 aaPredicted RBP16.36■□□□□ 0.21
PAF1-202ENST00000416728 SAMM50Q9Y512 469 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 PCDHA10Q9Y5I2 948 aa16.36■□□□□ 0.21
PAF1-202ENST00000416728 MAFBQ9Y5Q3 323 aaPredicted RBP16.36■□□□□ 0.21
PAF1-202ENST00000416728 TBX10O75333 385 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 DNAJB1P25685 340 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 PSMA5P28066 241 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 CRYBB1P53674 252 aaPredicted RBP16.35■□□□□ 0.21
PAF1-202ENST00000416728 SMAD2Q15796 467 aaKnown RBP16.35■□□□□ 0.21
PAF1-202ENST00000416728 SLC24A5Q71RS6 500 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 FBXL16Q8N461 479 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 RASGRP4Q8TDF6 673 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 POF1BQ8WVV4 589 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 FAM167AQ96KS9 214 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 OSMRQ99650 979 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 SLC26A6Q9BXS9 759 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 RNF26Q9BY78 433 aaPredicted RBP16.35■□□□□ 0.21
PAF1-202ENST00000416728 RGS18Q9NS28 235 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 GABBR1Q9UBS5 961 aa16.35■□□□□ 0.21
PAF1-202ENST00000416728 MYO7AQ13402 2215 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 PRR33A8MZF0 331 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 LINC01565O15544 149 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 MBTPS2O43462 519 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 DCXO43602 365 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 PPFIA3O75145 1194 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 VTNP04004 478 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 CIITAP33076 1130 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 IRS1P35568 1242 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 NDUFV1P49821 464 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 ADAM15Q13444 863 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 SMAD4Q13485 552 aaKnown RBP16.34■□□□□ 0.21
PAF1-202ENST00000416728 NTRK3Q16288 839 aa16.34■□□□□ 0.21
PAF1-202ENST00000416728 SPOUT1Q5T280 376 aaKnown RBP16.34■□□□□ 0.21
PAF1-202ENST00000416728 POP1Q99575 1024 aaKnown RBP16.34■□□□□ 0.21
PAF1-202ENST00000416728 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms