RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DAGLBQ8NCG7 672 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 BICD2Q8TD16 824 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 ADAMTS19Q8TE59 1207 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 TBC1D22BQ9NU19 505 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 CPLX1O14810 134 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 KRT76Q01546 638 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 TRMT1LQ7Z2T5 733 aaKnown RBP17.11■□□□□ 0.33
UBXN4-203ENST00000416538 BLIDQ8IZY5 108 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 SLC5A5Q92911 643 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 PPP1R16BQ96T49 567 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 CELF4Q9BZC1 486 aaKnown RBP17.11■□□□□ 0.33
UBXN4-203ENST00000416538 UNC45AQ9H3U1 944 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 GABBR1Q9UBS5 961 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 PADI3Q9ULW8 664 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 ADGRA3Q8IWK6 1321 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 BDP1A6H8Y1 2624 aa17.11■□□□□ 0.33
UBXN4-203ENST00000416538 MGEA5O60502 916 aa17.1■□□□□ 0.33
UBXN4-203ENST00000416538 BMP1P13497 986 aa17.1■□□□□ 0.33
UBXN4-203ENST00000416538 GATMP50440 423 aa17.1■□□□□ 0.33
UBXN4-203ENST00000416538 IER5Q5VY09 327 aa17.1■□□□□ 0.33
UBXN4-203ENST00000416538 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
UBXN4-203ENST00000416538 TMEM192Q8IY95 271 aa17.1■□□□□ 0.33
UBXN4-203ENST00000416538 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
UBXN4-203ENST00000416538 LINC01465Q8N7H1 131 aa17.1■□□□□ 0.33
UBXN4-203ENST00000416538 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
UBXN4-203ENST00000416538 ZNF689Q96CS4 500 aaPredicted RBP17.1■□□□□ 0.33
UBXN4-203ENST00000416538 IL17RAQ96F46 866 aa17.1■□□□□ 0.33
UBXN4-203ENST00000416538 MBOAT7Q96N66 472 aa17.1■□□□□ 0.33
UBXN4-203ENST00000416538 CHMP2AO43633 222 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 SLC37A4O43826 429 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 PFKFB2O60825 505 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 PSMD10O75832 226 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 USP11P51784 963 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 AK2P54819 239 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 ZNF484Q5JVG2 852 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 ETNPPLQ8TBG4 499 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 BBXQ8WY36 941 aaPredicted RBP17.09■□□□□ 0.33
UBXN4-203ENST00000416538 TSPYL2Q9H2G4 693 aaPredicted RBP17.09■□□□□ 0.33
UBXN4-203ENST00000416538 ERVK-5Q9HDB9 667 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 LMCD1Q9NZU5 365 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 GINS2Q9Y248 185 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 NOC2LQ9Y3T9 749 aaKnown RBP17.09■□□□□ 0.33
UBXN4-203ENST00000416538 PCDHA10Q9Y5I2 948 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 SQORQ9Y6N5 450 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 STK36Q9NRP7 1315 aa17.09■□□□□ 0.33
UBXN4-203ENST00000416538 TMEM150BA6NC51 233 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 FAM205CA6NFA0 338 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 WDR64B1ANS9 1081 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 H3BNC9 293 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 DGKIO75912 1065 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 SEC24BO95487 1268 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 VTNP04004 478 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 RPLP2P05387 115 aaKnown RBP17.08■□□□□ 0.32
UBXN4-203ENST00000416538 PSAPP07602 524 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 CLCN3P51790 818 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 PRKCEQ02156 737 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 ST3GAL1Q11201 340 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 PAK2Q13177 524 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 INF2Q27J81 1249 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 Q4G0T1 1027 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 LRCH2Q5VUJ6 765 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 CKAP2LQ8IYA6 745 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 OXER1Q8TDS5 423 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 PHF20Q9BVI0 1012 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 DISC1Q9NRI5 854 aa17.08■□□□□ 0.32
UBXN4-203ENST00000416538 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 M0QZ92 97 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 GAS7O60861 476 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 GPR32O75388 356 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 STBD1O95210 358 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 OATP04181 439 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 FDPSP14324 419 aaKnown RBP17.07■□□□□ 0.32
UBXN4-203ENST00000416538 CYP3A7P24462 503 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 CTNNB1P35222 781 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 ANAPC15P60006 121 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 GPM6BQ13491 265 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 KIZQ2M2Z5 673 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 EARS2Q5JPH6 523 aaKnown RBP17.07■□□□□ 0.32
UBXN4-203ENST00000416538 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 FAM228AQ86W67 206 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 LRRC71Q8N4P6 559 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 NECAB1Q8N987 351 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
UBXN4-203ENST00000416538 MRPL38Q96DV4 380 aaKnown RBP17.07■□□□□ 0.32
UBXN4-203ENST00000416538 SAMD11Q96NU1 681 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 UHRF1Q96T88 793 aaPredicted RBP17.07■□□□□ 0.32
UBXN4-203ENST00000416538 RIT2Q99578 217 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 OSMRQ99650 979 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 TEKT3Q9BXF9 490 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 SLKQ9H2G2 1235 aaPredicted RBP17.07■□□□□ 0.32
UBXN4-203ENST00000416538 SAMM50Q9Y512 469 aa17.07■□□□□ 0.32
UBXN4-203ENST00000416538 MRPL42Q9Y6G3 142 aaKnown RBP17.07■□□□□ 0.32
UBXN4-203ENST00000416538 HAX1O00165 279 aa17.06■□□□□ 0.32
UBXN4-203ENST00000416538 ME3Q16798 604 aa17.06■□□□□ 0.32
UBXN4-203ENST00000416538 NME8Q8N427 588 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms