RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 CMA1P23946 247 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 CDC25AP30304 524 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 CTTNQ14247 550 aaKnown RBP16.17■□□□□ 0.18
SGCE-202ENST00000415788 MFSD10Q14728 455 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 XKR3Q5GH77 459 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 TAF3Q5VWG9 929 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 SHC4Q6S5L8 630 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 TNS4Q8IZW8 715 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 RASSF8Q8NHQ8 419 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 ATP8B4Q8TF62 1192 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
SGCE-202ENST00000415788 CDK5RAP3Q96JB5 506 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 DOCK5Q9H7D0 1870 aa16.17■□□□□ 0.18
SGCE-202ENST00000415788 A0A1W2PQ45 241 aaPredicted RBP16.16■□□□□ 0.18
SGCE-202ENST00000415788 A0A1W2PQY0 241 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 MED24O75448 989 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 OATP04181 439 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 PSEN2P49810 448 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 PRKCEQ02156 737 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 UGCGQ16739 394 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 KIAA0753Q2KHM9 967 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 SPECC1Q5M775 1068 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 RESP18Q5W5W9 173 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 RBM43Q6ZSC3 357 aaKnown RBP16.16■□□□□ 0.18
SGCE-202ENST00000415788 EPSTI1Q96J88 318 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 PYM1Q9BRP8 204 aaKnown RBP16.16■□□□□ 0.18
SGCE-202ENST00000415788 STARD7Q9NQZ5 370 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 NRBP2Q9NSY0 501 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 CGNQ9P2M7 1197 aaKnown RBP16.16■□□□□ 0.18
SGCE-202ENST00000415788 POTEB3A0JP26 581 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 ZNF862O60290 1169 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 HBP1O60381 514 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 MARK3P27448 753 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 POTEBQ6S5H4 581 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 OTUD6AQ7L8S5 288 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 NACC1Q96RE7 527 aa16.16■□□□□ 0.18
SGCE-202ENST00000415788 ATP4AP20648 1035 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 CDC25BP30305 580 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 YWHABP31946 246 aaKnown RBP16.15■□□□□ 0.18
SGCE-202ENST00000415788 MNX1P50219 401 aaPredicted RBP16.15■□□□□ 0.18
SGCE-202ENST00000415788 PLCB4Q15147 1175 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 NFRKBQ6P4R8 1299 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 CCDC73Q6ZRK6 1079 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 USP49Q70CQ1 688 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 VTI1AQ96AJ9 217 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 TNMDQ9H2S6 317 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 RNPEPQ9H4A4 650 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 WRAP73Q9P2S5 460 aaPredicted RBP16.15■□□□□ 0.18
SGCE-202ENST00000415788 KIAA1024Q9UPX6 916 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 TRPC6Q9Y210 931 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 PPME1Q9Y570 386 aa16.15■□□□□ 0.18
SGCE-202ENST00000415788 A0A0U1RQG5 324 aaPredicted RBP16.14■□□□□ 0.17
SGCE-202ENST00000415788 COL6A1P12109 1028 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 PTPN11Q06124 597 aaPredicted RBP16.14■□□□□ 0.17
SGCE-202ENST00000415788 GABPB1Q06547 395 aaPredicted RBP16.14■□□□□ 0.17
SGCE-202ENST00000415788 GRB10Q13322 594 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 ZRSR1Q15695 479 aaKnown RBP16.14■□□□□ 0.17
SGCE-202ENST00000415788 TMEM119Q4V9L6 283 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 POTEGQ6S5H5 508 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 SESTD1Q86VW0 696 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 C7orf31Q8N865 590 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 MRPS27Q92552 414 aaKnown RBP16.14■□□□□ 0.17
SGCE-202ENST00000415788 ANKEF1Q9NU02 776 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 DNM3Q9UQ16 869 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 COL1A2P08123 1366 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 FAM237AA0A1B0GTK4 181 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 RRN3P2A6NIE6 340 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 ITGA7Q13683 1181 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 KARSQ15046 597 aaKnown RBP16.14■□□□□ 0.17
SGCE-202ENST00000415788 ECM1Q16610 540 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 NIFKQ9BYG3 293 aaKnown RBP16.14■□□□□ 0.17
SGCE-202ENST00000415788 C11orf49Q9H6J7 331 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 STK17AQ9UEE5 414 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 DBR1Q9UK59 544 aaKnown RBP16.14■□□□□ 0.17
SGCE-202ENST00000415788 NRCAMQ92823 1304 aa16.14■□□□□ 0.17
SGCE-202ENST00000415788 STBD1O95210 358 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 SMIM10L2AP0DMW4 78 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 SMIM10L2BP0DMW5 78 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 GNAT1P11488 350 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 ZNF75DP51815 510 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 PSMC6P62333 389 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 NCBP1Q09161 790 aaKnown RBP16.13■□□□□ 0.17
SGCE-202ENST00000415788 PPFIA1Q13136 1202 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 NBPF20Q3BBV1 942 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 ZNF484Q5JVG2 852 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 RRAGBQ5VZM2 374 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 ANO5Q75V66 913 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 CCDC186Q7Z3E2 898 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
SGCE-202ENST00000415788 PNMA5Q96PV4 448 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 SENP6Q9GZR1 1112 aaPredicted RBP16.13■□□□□ 0.17
SGCE-202ENST00000415788 CBX8Q9HC52 389 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 SEPT9Q9UHD8 586 aaPredicted RBP16.13■□□□□ 0.17
SGCE-202ENST00000415788 KCNH3Q9ULD8 1083 aa16.13■□□□□ 0.17
SGCE-202ENST00000415788 PLCG1P19174 1290 aa16.12■□□□□ 0.17
SGCE-202ENST00000415788 EN2P19622 333 aaPredicted RBP16.12■□□□□ 0.17
SGCE-202ENST00000415788 CHMP4BP1P59074 171 aa16.12■□□□□ 0.17
SGCE-202ENST00000415788 C1orf53Q5VUE5 145 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms