RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 DLG3Q92796 817 aa8.74□□□□□ -1.01
LINC00343-202ENST00000415294 CHMP4CQ96CF2 233 aa8.74□□□□□ -1.01
LINC00343-202ENST00000415294 PEX11GQ96HA9 241 aa8.74□□□□□ -1.01
LINC00343-202ENST00000415294 PRDM7Q9NQW5 492 aa8.74□□□□□ -1.01
LINC00343-202ENST00000415294 KCNH7Q9NS40 1196 aa8.74□□□□□ -1.01
LINC00343-202ENST00000415294 FBLN5Q9UBX5 448 aa8.74□□□□□ -1.01
LINC00343-202ENST00000415294 PRKD3O94806 890 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 CYBBP04839 570 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 LRRC32Q14392 662 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 BRINP3Q76B58 766 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 TP53INP2Q8IXH6 220 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 SH3RF2Q8TEC5 729 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 COG1Q8WTW3 980 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 TNFRSF12AQ9NP84 129 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 MYOTQ9UBF9 498 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 GPR160Q9UJ42 338 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 TRHDEQ9UKU6 1024 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 PNPLA6Q8IY17 1366 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 ERVK-7P63135 1459 aa8.73□□□□□ -1.01
LINC00343-202ENST00000415294 TET3O43151 1660 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 CAMTA1Q9Y6Y1 1673 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 RTEL1-TNFRSF6BF6WH68 1400 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 FBXO21O94952 628 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 KIF11P52732 1056 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 MCL1Q07820 350 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 SLC9A5Q14940 896 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 NR1I3Q14994 352 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 PAQR3Q6TCH7 311 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 HDGFL2Q7Z4V5 671 aaPredicted RBP8.72□□□□□ -1.01
LINC00343-202ENST00000415294 RASSF3Q86WH2 238 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 NME9Q86XW9 330 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 ZNF610Q8N9Z0 462 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 TTLL11Q8NHH1 800 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 AHCYL2Q96HN2 611 aaKnown RBP8.72□□□□□ -1.01
LINC00343-202ENST00000415294 CAMKK2Q96RR4 588 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 MBNL3Q9NUK0 354 aaKnown RBP8.72□□□□□ -1.01
LINC00343-202ENST00000415294 CTNND2Q9UQB3 1225 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 DHX29Q7Z478 1369 aaKnown RBP8.72□□□□□ -1.01
LINC00343-202ENST00000415294 UNC13BO14795 1591 aa8.72□□□□□ -1.01
LINC00343-202ENST00000415294 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.71□□□□□ -1.01
LINC00343-202ENST00000415294 BRWD3Q6RI45 1802 aa8.71□□□□□ -1.01
LINC00343-202ENST00000415294 CFAP65Q6ZU64 1925 aaKnown RBP8.71□□□□□ -1.01
LINC00343-202ENST00000415294 GABRDO14764 452 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 TGM5O43548 720 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 PSPNO60542 156 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 KRT37O76014 449 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 ZBTB7AO95365 584 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 FNTBP49356 437 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 ERVFRD-1P60508 538 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 SMAD3P84022 425 aaKnown RBP8.71□□□□□ -1.02
LINC00343-202ENST00000415294 TERF2Q15554 542 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 SMAD2Q15796 467 aaKnown RBP8.71□□□□□ -1.02
LINC00343-202ENST00000415294 NOL8Q76FK4 1167 aaKnown RBP8.71□□□□□ -1.02
LINC00343-202ENST00000415294 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.71□□□□□ -1.02
LINC00343-202ENST00000415294 RELTQ969Z4 430 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 SHISA4Q96DD7 197 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 TRIM8Q9BZR9 551 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 USP36Q9P275 1121 aaKnown RBP8.71□□□□□ -1.02
LINC00343-202ENST00000415294 ASH2LQ9UBL3 628 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 PCDHB4Q9Y5E5 795 aa8.71□□□□□ -1.02
LINC00343-202ENST00000415294 UTRNP46939 3433 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 RNASE1P07998 156 aaKnown RBP8.7□□□□□ -1.02
LINC00343-202ENST00000415294 SDHAP31040 664 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 AFMP43652 599 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 ERVK-21P61565 698 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 KRT85P78386 507 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 TMEM62Q0P6H9 643 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 NFE2Q16621 373 aaPredicted RBP8.7□□□□□ -1.02
LINC00343-202ENST00000415294 BROXQ5VW32 411 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 CLRN3Q8NCR9 226 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 LRRC59Q96AG4 307 aaKnown RBP8.7□□□□□ -1.02
LINC00343-202ENST00000415294 ELF4Q99607 663 aaPredicted RBP8.7□□□□□ -1.02
LINC00343-202ENST00000415294 TOMM22Q9NS69 142 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 H2AFY2Q9P0M6 372 aaPredicted RBP8.7□□□□□ -1.02
LINC00343-202ENST00000415294 ADAMTS6Q9UKP5 1117 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 LRRIQ1Q96JM4 1722 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 GPATCH8Q9UKJ3 1502 aaKnown RBP8.7□□□□□ -1.02
LINC00343-202ENST00000415294 KIAA1107Q9UPP5 1409 aa8.7□□□□□ -1.02
LINC00343-202ENST00000415294 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 TMEM2Q9UHN6 1383 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 DBHP09172 617 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 PTPN1P18031 435 aaKnown RBP8.69□□□□□ -1.02
LINC00343-202ENST00000415294 CD40P25942 277 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 HERVK_113P62684 666 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 ADCY1Q08828 1119 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 KLF1Q13351 362 aaPredicted RBP8.69□□□□□ -1.02
LINC00343-202ENST00000415294 TUSC3Q13454 348 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 ZNF792Q3KQV3 632 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 ZBTB46Q86UZ6 589 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 FMNL3Q8IVF7 1028 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 FLAD1Q8NFF5 587 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 CCDC136Q96JN2 1154 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 SLC13A1Q9BZW2 595 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 CD244Q9BZW8 370 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 C19orf44Q9H6X5 657 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 GEMIN8Q9NWZ8 242 aaKnown RBP8.69□□□□□ -1.02
LINC00343-202ENST00000415294 YBX2Q9Y2T7 364 aaKnown RBP8.69□□□□□ -1.02
LINC00343-202ENST00000415294 ASXL1Q8IXJ9 1541 aa8.69□□□□□ -1.02
LINC00343-202ENST00000415294 MROH1Q8NDA8 1641 aa8.68□□□□□ -1.02
LINC00343-202ENST00000415294 SHTN1A0MZ66 631 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms