RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 PLA2G2EQ9NZK7 142 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 NUP155O75694 1391 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 NSD2O96028 1365 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 ABHD14A-ACY1A0A1B0GW23 586 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 TISP43B9A030 160 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 B9A039 149 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 TNFRSF10CO14798 259 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 HSPA1AP0DMV8 641 aaKnown RBP3.09□□□□□ -1.91
MCF2-204ENST00000414978 HSPA1BP0DMV9 641 aaKnown RBP3.09□□□□□ -1.91
MCF2-204ENST00000414978 PHKG2P15735 406 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 AFF1P51825 1210 aaKnown RBP3.09□□□□□ -1.91
MCF2-204ENST00000414978 GJA9P57773 515 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 HSF5Q4G112 596 aaPredicted RBP3.09□□□□□ -1.91
MCF2-204ENST00000414978 ZBTB37Q5TC79 503 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 ACAD11Q709F0 780 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 GPR155Q7Z3F1 870 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 HID1Q8IV36 788 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 TRMT2AQ8IZ69 625 aaKnown RBP3.09□□□□□ -1.91
MCF2-204ENST00000414978 AHI1Q8N157 1196 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 KIAA1958Q8N8K9 716 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 SMC1BQ8NDV3 1235 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 TRIM63Q969Q1 353 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 FANCD2OSQ96PS1 177 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 TOMM22Q9NS69 142 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 WHRNQ9P202 907 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 PCDHB12Q9Y5F1 795 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 AFDNP55196 1824 aaKnown RBP3.09□□□□□ -1.91
MCF2-204ENST00000414978 RGS13O14921 159 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 PQBP1O60828 265 aaKnown RBP3.09□□□□□ -1.91
MCF2-204ENST00000414978 BAIAP3O94812 1187 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 ZBTB7AO95365 584 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 RBP3P10745 1247 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 VDRP11473 427 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 ATP2A2P16615 1042 aaKnown RBP3.09□□□□□ -1.91
MCF2-204ENST00000414978 SEPHS1P49903 392 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 TRAPPC3LQ5T215 181 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 ZPBP2Q6X784 338 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 LDHAL6AQ6ZMR3 332 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 EP400NLQ6ZTU2 488 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 OSTM1Q86WC4 334 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 SUGP1Q8IWZ8 645 aaKnown RBP3.09□□□□□ -1.91
MCF2-204ENST00000414978 SLFN12Q8IYM2 578 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 C2orf69Q8N8R5 385 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 ADAMTS18Q8TE60 1221 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 MCMBPQ9BTE3 642 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 PRDM14Q9GZV8 571 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 RRAGCQ9HB90 399 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 PLCB1Q9NQ66 1216 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 HDAC9Q9UKV0 1011 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 PHF24Q9UPV7 400 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 DNM3Q9UQ16 869 aa3.09□□□□□ -1.91
MCF2-204ENST00000414978 LRRC10BA6NIK2 292 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 ARNTLO00327 626 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 ASLP04424 464 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 PDE6AP16499 860 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 ADH6P28332 368 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 COPB2P35606 906 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 CHKAP35790 457 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 HALP42357 657 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 MAPK10P53779 464 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 ID3Q02535 119 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 TMEM132BQ14DG7 1078 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 ANO4Q32M45 955 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 MINDY4Q4G0A6 757 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 FSTL4Q6MZW2 842 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 FOXR1Q6PIV2 292 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 CYFIP1Q7L576 1253 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 CCDC103Q8IW40 242 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 TRIM22Q8IYM9 498 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 CPXCR1Q8N123 301 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 FAM156AQ8NDB6 213 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 C1orf159Q96HA4 380 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 NT5C1BQ96P26 610 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 SEZ6LQ9BYH1 1024 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 PUS7LQ9H0K6 701 aaKnown RBP3.09□□□□□ -1.92
MCF2-204ENST00000414978 QRSL1Q9H0R6 528 aaKnown RBP3.09□□□□□ -1.92
MCF2-204ENST00000414978 IPPKQ9H8X2 491 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 SP110Q9HB58 689 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 INTS7Q9NVH2 962 aaKnown RBP3.09□□□□□ -1.92
MCF2-204ENST00000414978 STAP2Q9UGK3 403 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 FBXL7Q9UJT9 491 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 ANAPC4Q9UJX5 808 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 SRPK3Q9UPE1 567 aa3.09□□□□□ -1.92
MCF2-204ENST00000414978 USP6P35125 1406 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 SHISA3A0PJX4 238 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 CCDC66A2RUB6 948 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 TCEA3O75764 348 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 LPLP06858 475 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 PLS3P13797 630 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 GFRA1P56159 465 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 SRSF2Q01130 221 aaKnown RBP3.08□□□□□ -1.92
MCF2-204ENST00000414978 CDKAL1Q5VV42 579 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 CIAPIN1Q6FI81 312 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 LETMD1Q6P1Q0 360 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 MAATS1Q7Z4T9 603 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 CPA6Q8N4T0 437 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 SH2D3CQ8N5H7 860 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 ENAHQ8N8S7 591 aaPredicted RBP3.08□□□□□ -1.92
MCF2-204ENST00000414978 CYB5D2Q8WUJ1 264 aa3.08□□□□□ -1.92
MCF2-204ENST00000414978 RTF1Q92541 710 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms