RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 TOB1P50616 345 aaPredicted RBP28.37■■■□□ 2.13
CPNE1-207ENST00000414664 MGAT3Q09327 533 aa28.37■■■□□ 2.13
CPNE1-207ENST00000414664 C4orf19Q8IY42 314 aa28.37■■■□□ 2.13
CPNE1-207ENST00000414664 METTL13Q8N6R0 699 aa28.37■■■□□ 2.13
CPNE1-207ENST00000414664 SEPT8Q92599 483 aa28.37■■■□□ 2.13
CPNE1-207ENST00000414664 ZSWIM4Q9H7M6 989 aa28.37■■■□□ 2.13
CPNE1-207ENST00000414664 TRPV2Q9Y5S1 764 aa28.37■■■□□ 2.13
CPNE1-207ENST00000414664 TET1Q8NFU7 2136 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 STBD1O95210 358 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 KCNJ6P48051 423 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 TBC1D8BQ0IIM8 1120 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 TARBP2Q15633 366 aaKnown RBP28.36■■■□□ 2.13
CPNE1-207ENST00000414664 TMEM266Q2M3C6 531 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 PLEKHG4Q58EX7 1191 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 KIAA0319LQ8IZA0 1049 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 DYDC2Q96IM9 177 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 EIF2AK1Q9BQI3 630 aaKnown RBP28.36■■■□□ 2.13
CPNE1-207ENST00000414664 LXNQ9BS40 222 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 PCDHB6Q9Y5E3 794 aa28.36■■■□□ 2.13
CPNE1-207ENST00000414664 LAD1O00515 517 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 TECP42680 631 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 MTERF2Q49AM1 385 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 EFCAB12Q6NXP0 572 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 OTUD6AQ7L8S5 288 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 DBF4BQ8NFT6 615 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 APBB2Q92870 758 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 SLC9A7Q96T83 725 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 CELF4Q9BZC1 486 aaKnown RBP28.35■■■□□ 2.13
CPNE1-207ENST00000414664 RGL1Q9NZL6 768 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 PPME1Q9Y570 386 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 SQORQ9Y6N5 450 aa28.35■■■□□ 2.13
CPNE1-207ENST00000414664 VPS37CA5D8V6 355 aaPredicted RBP28.34■■■□□ 2.13
CPNE1-207ENST00000414664 CYP4A11Q02928 519 aa28.34■■■□□ 2.13
CPNE1-207ENST00000414664 CTTNQ14247 550 aaKnown RBP28.34■■■□□ 2.13
CPNE1-207ENST00000414664 NBR1Q14596 966 aa28.34■■■□□ 2.13
CPNE1-207ENST00000414664 BRAPQ7Z569 592 aa28.34■■■□□ 2.13
CPNE1-207ENST00000414664 TPH2Q8IWU9 490 aa28.34■■■□□ 2.13
CPNE1-207ENST00000414664 ZNF710Q8N1W2 664 aa28.34■■■□□ 2.13
CPNE1-207ENST00000414664 USP38Q8NB14 1042 aa28.34■■■□□ 2.13
CPNE1-207ENST00000414664 PHOSPHO2Q8TCD6 241 aa28.34■■■□□ 2.13
CPNE1-207ENST00000414664 MAP7D2Q96T17 732 aa28.34■■■□□ 2.13
CPNE1-207ENST00000414664 HSD17B14Q9BPX1 270 aa28.34■■■□□ 2.13
CPNE1-207ENST00000414664 JPH2Q9BR39 696 aaPredicted RBP28.34■■■□□ 2.13
CPNE1-207ENST00000414664 SLITRK3O94933 977 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 ATP2A2P16615 1042 aaKnown RBP28.33■■■□□ 2.13
CPNE1-207ENST00000414664 TMEM62Q0P6H9 643 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 PTGDRQ13258 359 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 FBXO47Q5MNV8 452 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 ANO5Q75V66 913 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 EXOC8Q8IYI6 725 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 C4orf32Q8N8J7 132 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 ERMNQ8TAM6 284 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 IFIH1Q9BYX4 1025 aaKnown RBP28.33■■■□□ 2.13
CPNE1-207ENST00000414664 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.33■■■□□ 2.13
CPNE1-207ENST00000414664 FOXD4L1Q9NU39 408 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 KDM3AQ9Y4C1 1321 aa28.33■■■□□ 2.13
CPNE1-207ENST00000414664 EVPLQ92817 2033 aa28.32■■■□□ 2.12
CPNE1-207ENST00000414664 POTEMA6NI47 508 aa28.32■■■□□ 2.12
CPNE1-207ENST00000414664 HSP90AA1P07900 732 aaKnown RBP28.32■■■□□ 2.12
CPNE1-207ENST00000414664 GHRP10912 638 aa28.32■■■□□ 2.12
CPNE1-207ENST00000414664 RAB34Q9BZG1 259 aa28.32■■■□□ 2.12
CPNE1-207ENST00000414664 SUGCTQ9HAC7 445 aa28.32■■■□□ 2.12
CPNE1-207ENST00000414664 CYP26B1Q9NR63 512 aa28.32■■■□□ 2.12
CPNE1-207ENST00000414664 LYPLA2O95372 231 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 SYT1P21579 422 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 YWHABP31946 246 aaKnown RBP28.31■■■□□ 2.12
CPNE1-207ENST00000414664 DNM2P50570 870 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 CLCN3P51790 818 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 WDR5P61964 334 aaKnown RBP28.31■■■□□ 2.12
CPNE1-207ENST00000414664 LPIN1Q14693 890 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 RAB30Q15771 203 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 FAM109BQ6ICB4 259 aaPredicted RBP28.31■■■□□ 2.12
CPNE1-207ENST00000414664 TSHZ1Q6ZSZ6 1077 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 CEP170P1Q96L14 293 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 WRAP73Q9P2S5 460 aaPredicted RBP28.31■■■□□ 2.12
CPNE1-207ENST00000414664 MSRAQ9UJ68 235 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 AKT3Q9Y243 479 aa28.31■■■□□ 2.12
CPNE1-207ENST00000414664 TMEM150BA6NC51 233 aa28.3■■■□□ 2.12
CPNE1-207ENST00000414664 GRXCR1A8MXD5 290 aa28.3■■■□□ 2.12
CPNE1-207ENST00000414664 PRPHP41219 470 aa28.3■■■□□ 2.12
CPNE1-207ENST00000414664 FXR2P51116 673 aaKnown RBP eCLIP28.3■■■□□ 2.122e-6■■■□□ 18.4
CPNE1-207ENST00000414664 PLA2G4FQ68DD2 849 aa28.3■■■□□ 2.12
CPNE1-207ENST00000414664 LRRC71Q8N4P6 559 aa28.3■■■□□ 2.12
CPNE1-207ENST00000414664 LINC01465Q8N7H1 131 aa28.3■■■□□ 2.12
CPNE1-207ENST00000414664 CEP89Q96ST8 783 aa28.3■■■□□ 2.12
CPNE1-207ENST00000414664 TUFT1Q9NNX1 390 aa28.3■■■□□ 2.12
CPNE1-207ENST00000414664 STK24Q9Y6E0 443 aa28.3■■■□□ 2.12
CPNE1-207ENST00000414664 MAFO75444 373 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-207ENST00000414664 CDC42EP1Q00587 391 aa28.29■■■□□ 2.12
CPNE1-207ENST00000414664 PDIA5Q14554 519 aa28.29■■■□□ 2.12
CPNE1-207ENST00000414664 TCTN1Q2MV58 587 aa28.29■■■□□ 2.12
CPNE1-207ENST00000414664 ODR4Q5SWX8 454 aa28.29■■■□□ 2.12
CPNE1-207ENST00000414664 FAM43BQ6ZT52 329 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-207ENST00000414664 SLC7A3Q8WY07 619 aa28.29■■■□□ 2.12
CPNE1-207ENST00000414664 SH2D3AQ9BRG2 576 aa28.29■■■□□ 2.12
CPNE1-207ENST00000414664 OSBPL7Q9BZF2 842 aa28.29■■■□□ 2.12
CPNE1-207ENST00000414664 GINS2Q9Y248 185 aa28.29■■■□□ 2.12
CPNE1-207ENST00000414664 LAMA3Q16787 3333 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 TMEM265A0A087WTH1 108 aa28.28■■■□□ 2.12
CPNE1-207ENST00000414664 IGKV6-21A0A0C4DH24 114 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms