RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CHCHD3Q9NX63 227 aaKnown RBP10.32□□□□□ -0.76
SNHG3-201ENST00000413987 IKBKBO14920 756 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 PLOD3O60568 738 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 ERLIN1O75477 346 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 MAPK9P45984 424 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 LONRF2Q1L5Z9 754 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 IGF2-ASQ6U949 168 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 HDXQ7Z353 690 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 AFAP1L2Q8N4X5 818 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 FSIP1Q8NA03 581 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 ZKSCAN3Q9BRR0 538 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 NIF3L1Q9GZT8 377 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 GOLPH3LQ9H4A5 285 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 A0A1W2PQ27 194 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 A0A1W2PQ64 194 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 A0A1W2PQD8 194 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 SYNDIG1LA6NDD5 238 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 ARHGAP6O43182 974 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 YBX3P16989 372 aaKnown RBP eCLIP10.31□□□□□ -0.76
SNHG3-201ENST00000413987 ADD1P35611 737 aaKnown RBP10.31□□□□□ -0.76
SNHG3-201ENST00000413987 KRT20P35900 424 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 ANTXR2P58335 489 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 PPARAQ07869 468 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 NFIAQ12857 509 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 COX10Q12887 443 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 SWT1Q5T5J6 900 aaKnown RBP10.31□□□□□ -0.76
SNHG3-201ENST00000413987 XRRA1Q6P2D8 792 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 Q6ZUG5 572 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 ARHGAP27Q6ZUM4 889 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 CYB5R4Q7L1T6 521 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 CCDC91Q7Z6B0 441 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 NAXEQ8NCW5 288 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 PHC3Q8NDX5 983 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 OR8H1Q8NGG4 311 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 MRPS27Q92552 414 aaKnown RBP10.31□□□□□ -0.76
SNHG3-201ENST00000413987 DDX11Q96FC9 970 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 DYNLL2Q96FJ2 89 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 SPON2Q9BUD6 331 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 CRNKL1Q9BZJ0 848 aaKnown RBP10.31□□□□□ -0.76
SNHG3-201ENST00000413987 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
SNHG3-201ENST00000413987 KIAA1468Q9P260 1216 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 STRIP2Q9ULQ0 834 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 PHTF1Q9UMS5 762 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 MRFAP1Q9Y605 127 aa10.31□□□□□ -0.76
SNHG3-201ENST00000413987 GPR75-ASB3A0A0A6YYF3 556 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 EIF3CLB5ME19 914 aaKnown RBP10.3□□□□□ -0.76
SNHG3-201ENST00000413987 GFPT2O94808 682 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 IPO7O95373 1038 aaKnown RBP10.3□□□□□ -0.76
SNHG3-201ENST00000413987 CPP00450 1065 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 TUBBP07437 444 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 GNAT2P19087 354 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 CRKP46108 304 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 CORO7P57737 925 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 NLRP12P59046 1061 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 GSTO1P78417 241 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 CXCL9Q07325 125 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 TUBB2AQ13885 445 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 PLCB4Q15147 1175 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 EML3Q32P44 896 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 APOBEC3HQ6NTF7 200 aaKnown RBP10.3□□□□□ -0.76
SNHG3-201ENST00000413987 TRIM50Q86XT4 487 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 TEX11Q8IYF3 940 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 SLC44A5Q8NCS7 719 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 GABPB2Q8TAK5 448 aaPredicted RBP10.3□□□□□ -0.76
SNHG3-201ENST00000413987 NINJ1Q92982 152 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 ZBTB10Q96DT7 871 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 EIF3CQ99613 913 aaKnown RBP10.3□□□□□ -0.76
SNHG3-201ENST00000413987 TUBB2BQ9BVA1 445 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 NACAP1Q9BZK3 213 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 SNCAIPQ9Y6H5 919 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 GAKO14976 1311 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 CDK5RAP2Q96SN8 1893 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 AKR1B10O60218 316 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 EGFRP00533 1210 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 GALNSP34059 522 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 ME1P48163 572 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 PLCD1P51178 756 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 TCP10Q12799 353 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 ADALQ6DHV7 355 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 ERMP1Q7Z2K6 904 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 ZFPM1Q8IX07 1006 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 EFCAB13Q8IY85 973 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 FMR1NBQ8N0W7 255 aaPredicted RBP10.3□□□□□ -0.76
SNHG3-201ENST00000413987 LSMEM1Q8N8F7 131 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 JMYQ8N9B5 988 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 SMARCC2Q8TAQ2 1214 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 BHMTQ93088 406 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 PPM1MQ96MI6 270 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 GBP3Q9H0R5 595 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 ZNRF3Q9ULT6 936 aa10.3□□□□□ -0.76
SNHG3-201ENST00000413987 LUC7L2Q9Y383 392 aaKnown RBP10.3□□□□□ -0.76
SNHG3-201ENST00000413987 FLT1P17948 1338 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 SFI1A8K8P3 1242 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 CFAP99D6REC4 459 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 F5H423 210 aaPredicted RBP10.29□□□□□ -0.76
SNHG3-201ENST00000413987 FZD6O60353 706 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 BAG3O95817 575 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 STIP1P31948 543 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms