RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PRSS38A1L453 326 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 GOLGA6L22H0YM25 854 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 ELL2O00472 640 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 SRGAP3O43295 1099 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 PRPF6O94906 941 aaKnown RBP6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 ZRANB2O95218 330 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 RNASE1P07998 156 aaKnown RBP6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 LPOP22079 712 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 HERVK_113P62684 666 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 UBE4AQ14139 1066 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 SNX17Q15036 470 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 TTC38Q5R3I4 469 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 TIGD7Q6NT04 549 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 EPM2AIP1Q7L775 607 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 PPM1NQ8N819 430 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 ORAI2Q96SN7 254 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 BCAS3Q9H6U6 928 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 RC3H2Q9HBD1 1191 aaKnown RBP6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 PRDM11Q9NQV5 511 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 UCKL1Q9NWZ5 548 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 ARHGAP28Q9P2N2 729 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 RIPOR2Q9Y4F9 1068 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 ASB1Q9Y576 335 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 HCFC2Q9Y5Z7 792 aa6.17□□□□□ -1.42
HMGB3P31-201ENST00000413333 ZBTB7AO95365 584 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 HSPA6P17066 643 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 AGXTP21549 392 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 C5AR1P21730 350 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 MC4RP32245 332 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 SLC6A3Q01959 620 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 HDAC1Q13547 482 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 RAB3GAP1Q15042 981 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 RRP12Q5JTH9 1297 aaKnown RBP6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 ZBTB41Q5SVQ8 909 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 NFXL1Q6ZNB6 911 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 RTN4RL1Q86UN2 441 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 MIER2Q8N344 545 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 TTLL11Q8NHH1 800 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 ABHD4Q8TB40 342 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 E2F7Q96AV8 911 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 FOXRED1Q96CU9 486 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 RPS6KC1Q96S38 1066 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 MPHOSPH6Q99547 160 aaKnown RBP6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 NUP88Q99567 741 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 CSRNP2Q9H175 543 aa6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 MBNL3Q9NUK0 354 aaKnown RBP6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 SAP30BPQ9UHR5 308 aaKnown RBP6.16□□□□□ -1.42
HMGB3P31-201ENST00000413333 ST20-MTHFSA0A0A6YYL1 179 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 AP1G1O43747 822 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 MPOP05164 745 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 SPINK2P20155 84 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 MTNR1BP49286 362 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 LGALS4P56470 323 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 CCT2P78371 535 aaKnown RBP6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 PRR5P85299 388 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 KIF23Q02241 960 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 OS9Q13438 667 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 NR1I3Q14994 352 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 BRD3Q15059 726 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 PITRM1Q5JRX3 1037 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 ADGRF1Q5T601 910 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 MORC4Q8TE76 937 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 MAML3Q96JK9 1138 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 AIFM3Q96NN9 605 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 PDGFDQ9GZP0 370 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 RNF32Q9H0A6 362 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 MYH16Q9H6N6 1097 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 SLC39A2Q9NP94 309 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 NMRK2Q9NPI5 230 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 CHST12Q9NRB3 414 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 DTLQ9NZJ0 730 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 DDX20Q9UHI6 824 aaKnown RBP6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 DPP7Q9UHL4 492 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 CTNND2Q9UQB3 1225 aa6.15□□□□□ -1.42
HMGB3P31-201ENST00000413333 PLEKHD1A6NEE1 506 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 ERC2O15083 957 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 NDUFS2O75306 463 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 OFD1O75665 1012 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 PRLP01236 227 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 ASGR2P07307 311 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 AOAHP28039 575 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 CD97P48960 835 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 RGS3P49796 1198 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 ERVFRD-1P60508 538 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 CDK17Q00537 523 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 ADCY2Q08462 1091 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 DBPQ10586 325 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 MOGSQ13724 837 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 ZNF267Q14586 743 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 GRM3Q14832 879 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 MYBPC3Q14896 1274 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 SLC9A5Q14940 896 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 ZNF792Q3KQV3 632 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 GORABQ5T7V8 394 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 SLFN12LQ6IEE8 588 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 UNQ6494/PRO21346Q6UXR6 183 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 RPTNQ6XPR3 784 aa6.14□□□□□ -1.43
HMGB3P31-201ENST00000413333 CATIPQ7Z7H3 387 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms