RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 H2AFVQ71UI9 128 aa20.75■□□□□ 0.91
TNFRSF8-202ENST00000413146 SP8Q8IXZ3 490 aa20.75■□□□□ 0.91
TNFRSF8-202ENST00000413146 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.75■□□□□ 0.91
TNFRSF8-202ENST00000413146 AP1M1Q9BXS5 423 aa20.75■□□□□ 0.91
TNFRSF8-202ENST00000413146 ZC3H12CQ9C0D7 883 aaKnown RBP20.75■□□□□ 0.91
TNFRSF8-202ENST00000413146 ASTN1O14525 1302 aa20.75■□□□□ 0.91
TNFRSF8-202ENST00000413146 NFIAQ12857 509 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 BMT2Q1RMZ1 405 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 METTL13Q8N6R0 699 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 LRRC45Q96CN5 670 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 FAM20AQ96MK3 541 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 AMNQ9BXJ7 453 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 EPN3Q9H201 632 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 CCDC188H7C350 402 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 JAM2P57087 298 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 CYP4A11Q02928 519 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 HHIPL2Q6UWX4 724 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 LRIG3Q6UXM1 1119 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 SPATS2Q86XZ4 545 aaKnown RBP20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 SYCE1Q8N0S2 351 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 SLC35C1Q96A29 364 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 BHMT2Q9H2M3 363 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 POLD4Q9HCU8 107 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 SIX2Q9NPC8 291 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 LRRC4BQ9NT99 713 aa20.74■□□□□ 0.91
TNFRSF8-202ENST00000413146 A0A0A6YYK5 440 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 RSPH10B2B2RC85 870 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 SART1O43290 800 aaKnown RBP20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 PPP1R37O75864 691 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 RSPH10BP0C881 870 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 ECHS1P30084 290 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 INPP5BP32019 993 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 CASP4P49662 377 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 MKL1Q969V6 931 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 LENG9Q96B70 501 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 P2RX7Q99572 595 aaKnown RBP20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 DNAJC18Q9H819 358 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 NYAP2Q9P242 653 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 AJAP1Q9UKB5 411 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 NENFQ9UMX5 172 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 ATXN2Q99700 1313 aaKnown RBP20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 KRIT1O00522 736 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 HSD17B3P37058 310 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 USH1GQ495M9 461 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 APOBEC3HQ6NTF7 200 aaKnown RBP20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 DDX47Q9H0S4 455 aaKnown RBP20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 TMBIM4Q9HC24 238 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 INTUQ9ULD6 942 aa20.73■□□□□ 0.91
TNFRSF8-202ENST00000413146 FAM196BA6NMK8 535 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 FAM86B1E9PN63 330 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 GCOM1H8Y6P7 765 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 CLIC2O15247 247 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 KIAA0754O94854 1291 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 FOSP01100 380 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 FAM86B2P0C5J1 330 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 MYZAPP0CAP1 466 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 FERP16591 822 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 SREBF1P36956 1147 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 CERKLQ49MI3 558 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 DAAM2Q86T65 1068 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 RUSC1Q9BVN2 902 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 CENPHQ9H3R5 247 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 SUCLA2Q9P2R7 463 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 RABGAP1Q9Y3P9 1069 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 PCDHB13Q9Y5F0 798 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 GTPBP10A4D1E9 387 aaKnown RBP20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 MDH1P40925 334 aaKnown RBP20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 SNAP25P60880 206 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 ITGB3BPQ13352 177 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 PTGISQ16647 500 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 DOK7Q18PE1 504 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 SLFN11Q7Z7L1 901 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 FBXO11Q86XK2 927 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 ZFPM1Q8IX07 1006 aa20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 U2AF1L4Q8WU68 220 aaKnown RBP20.72■□□□□ 0.91
TNFRSF8-202ENST00000413146 ZBTB48P10074 688 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 IKQ13123 557 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 GJB7Q6PEY0 223 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 DDX42Q86XP3 938 aaKnown RBP eCLIP20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 ARFGAP2Q8N6H7 521 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 SIPA1L1O43166 1804 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 DDX3XO00571 662 aaKnown RBP eCLIP20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 PPP1R12BO60237 982 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 GFPT2O94808 682 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 EYA4O95677 639 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 HPDP32754 393 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 CTNNA1P35221 906 aaKnown RBP20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 STAT1P42224 750 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 DDR1Q08345 913 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 SHROOM1Q2M3G4 852 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 NAA35Q5VZE5 725 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 MICALCLQ6ZW33 695 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 RASGEF1CQ8N431 466 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 SLITRK6Q9H5Y7 841 aa20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 QTRT2Q9H974 415 aaKnown RBP20.71■□□□□ 0.91
TNFRSF8-202ENST00000413146 G3V3G9 751 aa20.7■□□□□ 0.9
TNFRSF8-202ENST00000413146 MSH4O15457 936 aa20.7■□□□□ 0.9
TNFRSF8-202ENST00000413146 GAP43P17677 238 aa20.7■□□□□ 0.9
TNFRSF8-202ENST00000413146 NPEPPSP55786 919 aa20.7■□□□□ 0.9
TNFRSF8-202ENST00000413146 ICA1Q05084 483 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms