RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 RIC8BQ9NVN3 520 aa5.65□□□□□ -1.51
BRCA1-204ENST00000412061 ANAPC4Q9UJX5 808 aa5.65□□□□□ -1.51
BRCA1-204ENST00000412061 LUC7L2Q9Y383 392 aaKnown RBP5.65□□□□□ -1.51
BRCA1-204ENST00000412061 NUDT19A8MXV4 375 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 BUB1BO60566 1050 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-204ENST00000412061 LTFP02788 710 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 U2AF1L5P0DN76 240 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-204ENST00000412061 TAL1P17542 331 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-204ENST00000412061 CCND1P24385 295 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 LSP1P33241 339 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 PHC1P78364 1004 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 U2AF1Q01081 240 aaKnown RBP eCLIP5.64□□□□□ -1.51
BRCA1-204ENST00000412061 TMEM132BQ14DG7 1078 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 RAB3GAP1Q15042 981 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 TMEM95Q3KNT9 176 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 GPR158Q5T848 1215 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 BROXQ5VW32 411 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 ATG4DQ86TL0 474 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-204ENST00000412061 MORC1Q86VD1 984 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 ZZZ3Q8IYH5 903 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 CLRN3Q8NCR9 226 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 TTLL11Q8NHH1 800 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 CLEC4DQ8WXI8 215 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 TSPAN17Q96FV3 270 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 MENTQ9BUN1 341 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 MAP3K20Q9NYL2 800 aaKnown RBP5.64□□□□□ -1.51
BRCA1-204ENST00000412061 SWAP70Q9UH65 585 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 PUF60Q9UHX1 559 aaKnown RBP5.64□□□□□ -1.51
BRCA1-204ENST00000412061 TELO2Q9Y4R8 837 aa5.64□□□□□ -1.51
BRCA1-204ENST00000412061 OR14I1A6ND48 311 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 FAM90A27PA6NNH2 459 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 K7ESF4 209 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 SDHBP21912 280 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 SDHAP31040 664 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 MAPKAPK2P49137 400 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 SMAD3P84022 425 aaKnown RBP5.63□□□□□ -1.51
BRCA1-204ENST00000412061 SEC23AQ15436 765 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 TERF2Q15554 542 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 SMAD2Q15796 467 aaKnown RBP5.63□□□□□ -1.51
BRCA1-204ENST00000412061 ABCB5Q2M3G0 1257 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 MINDY4Q4G0A6 757 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 COBLL1Q53SF7 1204 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 FAM83BQ5T0W9 1011 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 FYB2Q5VWT5 728 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 ERAP2Q6P179 960 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 RPTNQ6XPR3 784 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 KRBA2Q6ZNG9 492 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 ZNF610Q8N9Z0 462 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 AHCYL2Q96HN2 611 aaKnown RBP5.63□□□□□ -1.51
BRCA1-204ENST00000412061 RPS6KL1Q9Y6S9 549 aa5.63□□□□□ -1.51
BRCA1-204ENST00000412061 PRAMEF25A6NGN4 478 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 ABLIM1O14639 778 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 APAF1O14727 1248 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 TCEA3O75764 348 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 SNUPNO95149 360 aaKnown RBP5.62□□□□□ -1.51
BRCA1-204ENST00000412061 C4BPAP04003 597 aaKnown RBP5.62□□□□□ -1.51
BRCA1-204ENST00000412061 MYBL2P10244 700 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 PF4V1P10720 104 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 CD40P25942 277 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 HTR3AP46098 478 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 FNTBP49356 437 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 PRR5P85299 388 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 GRIN1Q05586 938 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 LRRC32Q14392 662 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 PAN2Q504Q3 1202 aaKnown RBP5.62□□□□□ -1.51
BRCA1-204ENST00000412061 ZC3H14Q6PJT7 736 aaKnown RBP5.62□□□□□ -1.51
BRCA1-204ENST00000412061 RASSF3Q86WH2 238 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 AMOTL1Q8IY63 956 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 FAM9BQ8IZU0 186 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 ARRDC4Q8NCT1 418 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 STRBPQ96SI9 672 aaKnown RBP5.62□□□□□ -1.51
BRCA1-204ENST00000412061 RCAN3Q9UKA8 241 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 ZBTB21Q9ULJ3 1066 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 FAM50BQ9Y247 325 aa5.62□□□□□ -1.51
BRCA1-204ENST00000412061 NOC2LQ9Y3T9 749 aaKnown RBP5.62□□□□□ -1.51
BRCA1-204ENST00000412061 WASHC2AQ641Q2 1341 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 RASSF10A6NK89 507 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 ACOT7O00154 380 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 BIN1O00499 593 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 FOXP2O15409 715 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 GLI1P08151 1106 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 FAHP16930 419 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 PTX3P26022 381 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-204ENST00000412061 SERPINB3P29508 390 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 TRAPPC10P48553 1259 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 ERVK-21P61565 698 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 HERVK_113P62684 666 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 ADCY1Q08828 1119 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 EPHA7Q15375 998 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 PLEKHN1Q494U1 663 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-204ENST00000412061 ANO1Q5XXA6 986 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 OLFML2BQ68BL8 750 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 CBLL1Q75N03 491 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 NME9Q86XW9 330 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 IRF2BP1Q8IU81 584 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 FAM126BQ8IXS8 530 aa5.61□□□□□ -1.51
BRCA1-204ENST00000412061 ENAHQ8N8S7 591 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-204ENST00000412061 VPS37AQ8NEZ2 397 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms