RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 GABBR1Q9UBS5 961 aa25.27■■□□□ 1.64
MSH6-202ENST00000411819 KDM3AQ9Y4C1 1321 aa25.27■■□□□ 1.64
MSH6-202ENST00000411819 WDR64B1ANS9 1081 aa25.26■■□□□ 1.63
MSH6-202ENST00000411819 DEXIO95424 95 aa25.26■■□□□ 1.63
MSH6-202ENST00000411819 NFX1Q12986 1120 aaKnown RBP25.26■■□□□ 1.63
MSH6-202ENST00000411819 RC3H2Q9HBD1 1191 aaKnown RBP25.26■■□□□ 1.63
MSH6-202ENST00000411819 RWDD3Q9Y3V2 267 aa25.26■■□□□ 1.63
MSH6-202ENST00000411819 MAFBQ9Y5Q3 323 aaPredicted RBP25.26■■□□□ 1.63
MSH6-202ENST00000411819 ZBTB42B2RXF5 422 aa25.25■■□□□ 1.63
MSH6-202ENST00000411819 CHMP2AO43633 222 aa25.25■■□□□ 1.63
MSH6-202ENST00000411819 NPAS4Q8IUM7 802 aa25.25■■□□□ 1.63
MSH6-202ENST00000411819 KIAA0319LQ8IZA0 1049 aa25.25■■□□□ 1.63
MSH6-202ENST00000411819 METTL13Q8N6R0 699 aa25.25■■□□□ 1.63
MSH6-202ENST00000411819 TBCKQ8TEA7 893 aa25.25■■□□□ 1.63
MSH6-202ENST00000411819 PCDHA4Q9UN74 947 aa25.25■■□□□ 1.63
MSH6-202ENST00000411819 ATG2AQ2TAZ0 1938 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 KIAA1671Q9BY89 1806 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 MSH4O15457 936 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 GAS7O60861 476 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 RPS6KA5O75582 802 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 DGKIO75912 1065 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 C22orf31O95567 290 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 STAG3L1P0CL83 205 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 KCNA5P22460 613 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 RTN4RL1Q86UN2 441 aaPredicted RBP25.24■■□□□ 1.63
MSH6-202ENST00000411819 BANK1Q8NDB2 785 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 ZNF689Q96CS4 500 aaPredicted RBP25.24■■□□□ 1.63
MSH6-202ENST00000411819 FAM167AQ96KS9 214 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 C11orf84Q9BUA3 381 aaPredicted RBP25.24■■□□□ 1.63
MSH6-202ENST00000411819 C22orf23Q9BZE7 217 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 CEP131Q9UPN4 1083 aa25.24■■□□□ 1.63
MSH6-202ENST00000411819 CSPG5O95196 566 aa25.23■■□□□ 1.63
MSH6-202ENST00000411819 BMPR1AP36894 532 aa25.23■■□□□ 1.63
MSH6-202ENST00000411819 USP11P51784 963 aa25.23■■□□□ 1.63
MSH6-202ENST00000411819 PAN2Q504Q3 1202 aaKnown RBP25.23■■□□□ 1.63
MSH6-202ENST00000411819 LRCH2Q5VUJ6 765 aa25.23■■□□□ 1.63
MSH6-202ENST00000411819 BLIDQ8IZY5 108 aa25.23■■□□□ 1.63
MSH6-202ENST00000411819 TEKT3Q9BXF9 490 aa25.23■■□□□ 1.63
MSH6-202ENST00000411819 CDHR5Q9HBB8 845 aa25.23■■□□□ 1.63
MSH6-202ENST00000411819 DISC1Q9NRI5 854 aa25.23■■□□□ 1.63
MSH6-202ENST00000411819 LRFN2Q9ULH4 789 aa25.23■■□□□ 1.63
MSH6-202ENST00000411819 NOC2LQ9Y3T9 749 aaKnown RBP25.23■■□□□ 1.63
MSH6-202ENST00000411819 C5orf67F2Z3F1 127 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 VTNP04004 478 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 RB1P06400 928 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 KIZQ2M2Z5 673 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 TCEAL5Q5H9L2 206 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 EP400NLQ6ZTU2 488 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 TMEM40Q8WWA1 233 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 AIFM3Q96NN9 605 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 OSMRQ99650 979 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 TMX1Q9H3N1 280 aa25.22■■□□□ 1.63
MSH6-202ENST00000411819 NSUN3Q9H649 340 aaKnown RBP25.22■■□□□ 1.63
MSH6-202ENST00000411819 DENND3A2RUS2 1198 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 EDIL3O43854 480 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 TDP2O95551 362 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 LINC00271P0C7V0 271 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 CLCN3P51790 818 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 JAK3P52333 1124 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 ODR4Q5SWX8 454 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 CMTR2Q8IYT2 770 aaKnown RBP25.21■■□□□ 1.63
MSH6-202ENST00000411819 SLC5A5Q92911 643 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 CLP1Q92989 425 aaKnown RBP25.21■■□□□ 1.63
MSH6-202ENST00000411819 GJA10Q969M2 543 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 RIT2Q99578 217 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 UNC45AQ9H3U1 944 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 ERVK-5Q9HDB9 667 aa25.21■■□□□ 1.63
MSH6-202ENST00000411819 MRPL42Q9Y6G3 142 aaKnown RBP25.21■■□□□ 1.63
MSH6-202ENST00000411819 MYO7AQ13402 2215 aa25.2■■□□□ 1.62
MSH6-202ENST00000411819 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.2■■□□□ 1.62
MSH6-202ENST00000411819 GRM6O15303 877 aa25.2■■□□□ 1.62
MSH6-202ENST00000411819 CDKL5O76039 1030 aa25.2■■□□□ 1.62
MSH6-202ENST00000411819 OATP04181 439 aa25.2■■□□□ 1.62
MSH6-202ENST00000411819 PRKCEQ02156 737 aa25.2■■□□□ 1.62
MSH6-202ENST00000411819 DAGLBQ8NCG7 672 aa25.2■■□□□ 1.62
MSH6-202ENST00000411819 MAP7D2Q96T17 732 aa25.2■■□□□ 1.62
MSH6-202ENST00000411819 PPP4R2Q9NY27 417 aa25.2■■□□□ 1.62
MSH6-202ENST00000411819 AKT3Q9Y243 479 aa25.2■■□□□ 1.62
MSH6-202ENST00000411819 GPR182O15218 404 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 MAGEB2O15479 319 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 ZNF862O60290 1169 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 MGEA5O60502 916 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 SFNP31947 248 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 GATMP50440 423 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 CRYBB1P53674 252 aaPredicted RBP25.19■■□□□ 1.62
MSH6-202ENST00000411819 SCRN1Q12765 414 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 UGCGQ16739 394 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 LMAN2LQ9H0V9 348 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 SLKQ9H2G2 1235 aaPredicted RBP25.19■■□□□ 1.62
MSH6-202ENST00000411819 ST3GAL5Q9UNP4 418 aa25.19■■□□□ 1.62
MSH6-202ENST00000411819 SARSP49591 514 aaKnown RBP25.18■■□□□ 1.62
MSH6-202ENST00000411819 NONOQ15233 471 aaKnown RBP eCLIP25.18■■□□□ 1.62
MSH6-202ENST00000411819 LEXMQ3ZCV2 418 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 Q4G0T1 1027 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 GALNT17Q6IS24 598 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 EFCAB12Q6NXP0 572 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 MIER3Q7Z3K6 550 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 FAM228AQ86W67 206 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 CRIPAKQ8N1N5 446 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 LRRC71Q8N4P6 559 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms