RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 XKR3Q5GH77 459 aa18.33■□□□□ 0.52
NOD1-202ENST00000411552 GPR153Q6NV75 609 aa18.33■□□□□ 0.52
NOD1-202ENST00000411552 KIAA0319LQ8IZA0 1049 aa18.33■□□□□ 0.52
NOD1-202ENST00000411552 INTS4Q96HW7 963 aaKnown RBP18.33■□□□□ 0.52
NOD1-202ENST00000411552 NIFKQ9BYG3 293 aaKnown RBP18.33■□□□□ 0.52
NOD1-202ENST00000411552 RGL1Q9NZL6 768 aa18.33■□□□□ 0.52
NOD1-202ENST00000411552 WRAP73Q9P2S5 460 aaPredicted RBP18.33■□□□□ 0.52
NOD1-202ENST00000411552 SEPT9Q9UHD8 586 aaPredicted RBP18.33■□□□□ 0.52
NOD1-202ENST00000411552 CDY2AQ9Y6F7 541 aa18.33■□□□□ 0.52
NOD1-202ENST00000411552 DDX11L8A8MPP1 907 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 OR52Z1P0C646 297 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 TARBP2Q15633 366 aaKnown RBP18.32■□□□□ 0.52
NOD1-202ENST00000411552 IER5Q5VY09 327 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 NME8Q8N427 588 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 METTL13Q8N6R0 699 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 C4orf32Q8N8J7 132 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 DBF4BQ8NFT6 615 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 DYDC2Q96IM9 177 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 LXNQ9BS40 222 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 PCDHB6Q9Y5E3 794 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 GBF1Q92538 1859 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 MICAL3Q7RTP6 2002 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 CHD9Q3L8U1 2897 aa18.32■□□□□ 0.52
NOD1-202ENST00000411552 PTPRSQ13332 1948 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 POTEMA6NI47 508 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 MAGEB2O15479 319 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 GHRP10912 638 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 ATP2A2P16615 1042 aaKnown RBP18.31■□□□□ 0.52
NOD1-202ENST00000411552 CYP4A11Q02928 519 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 IKBKEQ14164 716 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 LPIN1Q14693 890 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 MTERF2Q49AM1 385 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 ANO5Q75V66 913 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 CEP89Q96ST8 783 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 EIF2AK1Q9BQI3 630 aaKnown RBP18.31■□□□□ 0.52
NOD1-202ENST00000411552 SH2D3AQ9BRG2 576 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 TRPV2Q9Y5S1 764 aa18.31■□□□□ 0.52
NOD1-202ENST00000411552 ABHD14A-ACY1A0A1B0GW23 586 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 M0QZ92 97 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 DKC1O60832 514 aaKnown RBP eCLIP18.3■□□□□ 0.52
NOD1-202ENST00000411552 SLITRK3O94933 977 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 PDCP20941 246 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 PBX2P40425 430 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 CLCN3P51790 818 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 WDR5P61964 334 aaKnown RBP18.3■□□□□ 0.52
NOD1-202ENST00000411552 TBC1D8BQ0IIM8 1120 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 CTTNQ14247 550 aaKnown RBP18.3■□□□□ 0.52
NOD1-202ENST00000411552 FBXO47Q5MNV8 452 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 PLA2G4FQ68DD2 849 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 EFCAB12Q6NXP0 572 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 TPH2Q8IWU9 490 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 LRRC71Q8N4P6 559 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 LINC01465Q8N7H1 131 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 SEPT8Q92599 483 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 HSD17B14Q9BPX1 270 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 PBX4Q9BYU1 374 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 IFIH1Q9BYX4 1025 aaKnown RBP18.3■□□□□ 0.52
NOD1-202ENST00000411552 CELF4Q9BZC1 486 aaKnown RBP18.3■□□□□ 0.52
NOD1-202ENST00000411552 ZSWIM4Q9H7M6 989 aa18.3■□□□□ 0.52
NOD1-202ENST00000411552 VPS37CA5D8V6 355 aaPredicted RBP18.29■□□□□ 0.52
NOD1-202ENST00000411552 VTNP04004 478 aa18.29■□□□□ 0.52
NOD1-202ENST00000411552 TECP42680 631 aa18.29■□□□□ 0.52
NOD1-202ENST00000411552 KCNJ6P48051 423 aa18.29■□□□□ 0.52
NOD1-202ENST00000411552 PTGDRQ13258 359 aa18.29■□□□□ 0.52
NOD1-202ENST00000411552 MKRN4PQ13434 485 aaPredicted RBP18.29■□□□□ 0.52
NOD1-202ENST00000411552 RILPL1Q5EBL4 403 aa18.29■□□□□ 0.52
NOD1-202ENST00000411552 Q7L0L9 218 aa18.29■□□□□ 0.52
NOD1-202ENST00000411552 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
NOD1-202ENST00000411552 C4orf19Q8IY42 314 aa18.29■□□□□ 0.52
NOD1-202ENST00000411552 SLC9A7Q96T83 725 aa18.29■□□□□ 0.52
NOD1-202ENST00000411552 ARID2Q68CP9 1835 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 KDM3AQ9Y4C1 1321 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 EFCAB14O75071 495 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 SYT1P21579 422 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 DNAJB2P25686 324 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 YWHABP31946 246 aaKnown RBP18.28■□□□□ 0.52
NOD1-202ENST00000411552 RABGGTBP53611 331 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 NPEPPSP55786 919 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 DEFB103AP81534 67 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 TSHZ1Q6ZSZ6 1077 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 ZNF579Q8NAF0 562 aaKnown RBP18.28■□□□□ 0.52
NOD1-202ENST00000411552 PHOSPHO2Q8TCD6 241 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 NEK9Q8TD19 979 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 APBB2Q92870 758 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 MAP7D2Q96T17 732 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 PPP1R16BQ96T49 567 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 AGO3Q9H9G7 860 aaKnown RBP18.28■□□□□ 0.52
NOD1-202ENST00000411552 SUGCTQ9HAC7 445 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 CDHR5Q9HBB8 845 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 CYP26B1Q9NR63 512 aa18.28■□□□□ 0.52
NOD1-202ENST00000411552 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.28■□□□□ 0.52
NOD1-202ENST00000411552 CHD7Q9P2D1 2997 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 ZBTB39O15060 712 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 MAFO75444 373 aaPredicted RBP18.27■□□□□ 0.52
NOD1-202ENST00000411552 TMOD1P28289 359 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 KIZQ2M2Z5 673 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 FERMT3Q86UX7 667 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 HERC6Q8IVU3 1022 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 DEFB123Q8N688 67 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms