RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SEC14L1Q92503 715 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 GMCL1Q96IK5 515 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 PI4KBQ9UBF8 816 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 VAV3Q9UKW4 847 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 RIMBP2O15034 1052 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 TOM1O60784 492 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 NR1D1P20393 614 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 ERVK-9P63128 1117 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 DDR1Q08345 913 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 MKNK1Q9BUB5 465 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 IDI2Q9BXS1 227 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 EPN3Q9H201 632 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 SLITRK6Q9H5Y7 841 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 TMBIM4Q9HC24 238 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 GGA2Q9UJY4 613 aa18.22■□□□□ 0.51
LIMS2-208ENST00000410011 DIS3Q9Y2L1 958 aaKnown RBP18.22■□□□□ 0.51
LIMS2-208ENST00000410011 SPDYE3A6NKU9 549 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 FAM86B1E9PN63 330 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 FAM86B2P0C5J1 330 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 GUCY2FP51841 1108 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 NFIAQ12857 509 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 CERKLQ49MI3 558 aaPredicted RBP18.21■□□□□ 0.51
LIMS2-208ENST00000410011 PACS2Q86VP3 889 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 SIAH1Q8IUQ4 282 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 METTL13Q8N6R0 699 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 SLC30A5Q8TAD4 765 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 RNPC3Q96LT9 517 aaKnown RBP18.21■□□□□ 0.51
LIMS2-208ENST00000410011 PIK3CDO00329 1044 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 SART1O43290 800 aaKnown RBP18.21■□□□□ 0.51
LIMS2-208ENST00000410011 CEP104O60308 925 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 LSP1P33241 339 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 PDCLQ13371 301 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 ENOX2Q16206 610 aaKnown RBP18.21■□□□□ 0.51
LIMS2-208ENST00000410011 FAM182BQ5T319 152 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 BTNL9Q6UXG8 535 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 FBXO11Q86XK2 927 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 KLHL7Q8IXQ5 586 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 ARFGAP2Q8N6H7 521 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 HES6Q96HZ4 224 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 USP21Q9UK80 565 aa18.21■□□□□ 0.51
LIMS2-208ENST00000410011 H0YGN5 161 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 NDUFAB1O14561 156 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 MSH4O15457 936 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 MUTP22033 750 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 STAT1P42224 750 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 DNA2P51530 1060 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 FKBP1AP62942 108 aaKnown RBP18.2■□□□□ 0.5
LIMS2-208ENST00000410011 HDLBPQ00341 1268 aaKnown RBP18.2■□□□□ 0.5
LIMS2-208ENST00000410011 ITGB3BPQ13352 177 aaPredicted RBP18.2■□□□□ 0.5
LIMS2-208ENST00000410011 TMEM179Q6ZVK1 233 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 PEX26Q7Z412 305 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 MAATS1Q7Z4T9 603 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 YTHDF3Q7Z739 585 aaKnown RBP18.2■□□□□ 0.5
LIMS2-208ENST00000410011 SH2D3CQ8N5H7 860 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 SYNPO2Q9UMS6 1093 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 PLAAQ9Y263 795 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 NFS1Q9Y697 457 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 DDX3XO00571 662 aaKnown RBP eCLIP18.2■□□□□ 0.5
LIMS2-208ENST00000410011 TGFB1I1O43294 461 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 TBCAO75347 108 aaKnown RBP18.2■□□□□ 0.5
LIMS2-208ENST00000410011 PPP1R37O75864 691 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 CRKP46108 304 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 SCNN1DP51172 638 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 TRADDQ15628 312 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 SLC27A3Q5K4L6 730 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 KCTD16Q68DU8 428 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 NT5DC3Q86UY8 548 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 BHMT2Q9H2M3 363 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 TUFT1Q9NNX1 390 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 GCNT4Q9P109 453 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 RABGAP1Q9Y3P9 1069 aa18.2■□□□□ 0.5
LIMS2-208ENST00000410011 F5H6K3 240 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 MEIS1O00470 390 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 PSMC2P35998 433 aaKnown RBP18.19■□□□□ 0.5
LIMS2-208ENST00000410011 MDH1P40925 334 aaKnown RBP18.19■□□□□ 0.5
LIMS2-208ENST00000410011 KLRC3Q07444 240 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 BIRC3Q13489 604 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 MTMR3Q13615 1198 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 SPDYCQ5MJ68 293 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 ZFPM1Q8IX07 1006 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 C3orf20Q8ND61 904 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 CCDC26Q8TAB7 109 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 HSD17B14Q9BPX1 270 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 EIF2AK1Q9BQI3 630 aaKnown RBP18.19■□□□□ 0.5
LIMS2-208ENST00000410011 STK33Q9BYT3 514 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 NOC2LQ9Y3T9 749 aaKnown RBP18.19■□□□□ 0.5
LIMS2-208ENST00000410011 UBE4BO95155 1302 aa18.19■□□□□ 0.5
LIMS2-208ENST00000410011 GOLGA6L10A6NI86 522 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 PPP1R12BO60237 982 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-208ENST00000410011 LMNB1P20700 586 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 HSD17B3P37058 310 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 RNASE9P60153 205 aaKnown RBP18.18■□□□□ 0.5
LIMS2-208ENST00000410011 PPP2R5EQ16537 467 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 DCAF17Q5H9S7 520 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-208ENST00000410011 RINT1Q6NUQ1 792 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 RUFY4Q6ZNE9 571 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 SEL1LQ9UBV2 794 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 SIPA1L1O43166 1804 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 ANKRD65E5RJM6 399 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 NCANO14594 1321 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms