RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 ARL13BQ3SXY8 428 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 TWF2Q6IBS0 349 aaKnown RBP9.8□□□□□ -0.84
PBRM1-208ENST00000410007 SWSAP1Q6NVH7 229 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 ECEL1O95672 775 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 GABPB1Q06547 395 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-208ENST00000410007 CEP55Q53EZ4 464 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 CAPN12Q6ZSI9 719 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 SMIM5Q71RC9 77 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 FBXO33Q7Z6M2 555 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 THEM5Q8N1Q8 247 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 MGARPQ8TDB4 240 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 FAM151AQ8WW52 585 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 GCNAQ96QF7 691 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 TEX13BQ9BXU2 312 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 CALN1Q9BXU9 219 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 PYCARDQ9ULZ3 195 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 PCDHA10Q9Y5I2 948 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 ENC1O14682 589 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 RASSF2P50749 326 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 ZNF543Q08ER8 600 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 COASYQ13057 564 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 TKFCQ3LXA3 575 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 DONSONQ9NYP3 566 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 BCAP29Q9UHQ4 241 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 RIMBP3CA6NJZ7 1639 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 RIMBP3BA6NNM3 1639 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 RIMBP3Q9UFD9 1639 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
PBRM1-208ENST00000410007 CEMIPQ8WUJ3 1361 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 CPS1P31327 1500 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 DENND3A2RUS2 1198 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 MYCP01106 439 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-208ENST00000410007 INHBAP08476 426 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 RPS12P25398 132 aaKnown RBP9.8□□□□□ -0.84
PBRM1-208ENST00000410007 INPP5BP32019 993 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 EXOSC10Q01780 885 aaKnown RBP9.8□□□□□ -0.84
PBRM1-208ENST00000410007 C4orf50Q6ZRC1 276 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 EFCAB13Q8IY85 973 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 TAB3Q8N5C8 712 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-208ENST00000410007 KCTD6Q8NC69 237 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 TMEM35BQ8NCS4 154 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 BEST2Q8NFU1 509 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 LXNQ9BS40 222 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 BCL2L12Q9HB09 334 aa9.8□□□□□ -0.84
PBRM1-208ENST00000410007 ZNF70Q9UC06 446 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-208ENST00000410007 PIK3C2BO00750 1634 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 LRRD1A4D1F6 860 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 SLC16A4O15374 487 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ATP2C1P98194 919 aaPredicted RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 GOLGA8FQ08AF8 430 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 GOLGA8DPQ0D2H9 430 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 KNOP1Q1ED39 458 aaKnown RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 BZW1Q7L1Q6 419 aaKnown RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 CACNA2D3Q8IZS8 1091 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 TTC39CQ8N584 583 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ARHGEF2Q92974 986 aaKnown RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 SCYL1Q96KG9 808 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 SPATA33Q96N06 139 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 CACYBPQ9HB71 228 aaKnown RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 MED4Q9NPJ6 270 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 LCMT1Q9UIC8 334 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 DNAJC12Q9UKB3 198 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 PTPN22Q9Y2R2 807 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 PCDHA13Q9Y5I0 950 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 CCDC160A6NGH7 325 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 LGALS16A8MUM7 142 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 NOL3O60936 208 aaKnown RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ACTN1P12814 892 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 CIITAP33076 1130 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 PDE1BQ01064 536 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 MTMR2Q13614 643 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 STAG2Q8N3U4 1231 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 GUF1Q8N442 669 aaKnown RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 CEP72Q9P209 647 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 KLHL14Q9P2G3 628 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 TECPR2O15040 1411 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 HUS1O60921 280 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 TDP2O95551 362 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 CDC42EP5Q6NZY7 148 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ARHGEF18Q6ZSZ5 1173 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 FMR1NBQ8N0W7 255 aaPredicted RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ACRBPQ8NEB7 543 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 PKNOX2Q96KN3 472 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 GCOM2Q9BZD3 368 aaPredicted RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ADAMTS1Q9UHI8 967 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 HACL1Q9UJ83 578 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 POTEFA5A3E0 1075 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 HGSO14964 777 aaPredicted RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 MFAP3LO75121 409 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 NDUFB10O96000 172 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 POTEIP0CG38 1075 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ATP1A3P13637 1013 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 PDIA5Q14554 519 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ZNF699Q32M78 642 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 POTEEQ6S8J3 1075 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 SRBD1Q8N5C6 995 aaKnown RBP9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ZNF280CQ8ND82 737 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 TTC1Q99614 292 aa9.79□□□□□ -0.84
PBRM1-208ENST00000410007 ZBED2Q9BTP6 218 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms