RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 LETM2Q2VYF4 491 aa20■□□□□ 0.79
LSM5-204ENST00000409909 B3GNT9Q6UX72 402 aa20■□□□□ 0.79
LSM5-204ENST00000409909 TSHZ1Q6ZSZ6 1077 aa20■□□□□ 0.79
LSM5-204ENST00000409909 NME8Q8N427 588 aa20■□□□□ 0.79
LSM5-204ENST00000409909 WASF1Q92558 559 aa20■□□□□ 0.79
LSM5-204ENST00000409909 CELF4Q9BZC1 486 aaKnown RBP20■□□□□ 0.79
LSM5-204ENST00000409909 PRDM6Q9NQX0 595 aa20■□□□□ 0.79
LSM5-204ENST00000409909 DDX25Q9UHL0 483 aaKnown RBP20■□□□□ 0.79
LSM5-204ENST00000409909 TRPV2Q9Y5S1 764 aa20■□□□□ 0.79
LSM5-204ENST00000409909 ENPP3O14638 875 aa19.99■□□□□ 0.79
LSM5-204ENST00000409909 CD52P31358 61 aa19.99■□□□□ 0.79
LSM5-204ENST00000409909 SFNP31947 248 aa19.99■□□□□ 0.79
LSM5-204ENST00000409909 PIK3AP1Q6ZUJ8 805 aa19.99■□□□□ 0.79
LSM5-204ENST00000409909 SP7Q8TDD2 431 aaPredicted RBP19.99■□□□□ 0.79
LSM5-204ENST00000409909 CDHR5Q9HBB8 845 aa19.99■□□□□ 0.79
LSM5-204ENST00000409909 SQORQ9Y6N5 450 aa19.99■□□□□ 0.79
LSM5-204ENST00000409909 KDM3AQ9Y4C1 1321 aa19.99■□□□□ 0.79
LSM5-204ENST00000409909 FAM205CA6NFA0 338 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 M0QZ92 97 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 LPXNO60711 386 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 POU3F3P20264 500 aaPredicted RBP19.98■□□□□ 0.79
LSM5-204ENST00000409909 JAK3P52333 1124 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 ERVK-21P61565 698 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 NR5A1Q13285 461 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 KRT40Q6A162 431 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 NEK8Q86SG6 692 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 RTN4RL1Q86UN2 441 aaPredicted RBP19.98■□□□□ 0.79
LSM5-204ENST00000409909 LINC01599Q8WXQ3 324 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 TNFRSF25Q93038 417 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 MTUS1Q9ULD2 1270 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 MTCH2Q9Y6C9 303 aa19.98■□□□□ 0.79
LSM5-204ENST00000409909 OATP04181 439 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 PRKCEQ02156 737 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 GRB10Q13322 594 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 PPP4R3AQ6IN85 833 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 MIER3Q7Z3K6 550 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 RDM1Q8NG50 284 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 FAM167AQ96KS9 214 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 TGS1Q96RS0 853 aaKnown RBP19.97■□□□□ 0.79
LSM5-204ENST00000409909 KCNMB3Q9NPA1 279 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 PADI3Q9ULW8 664 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 LIMCH1Q9UPQ0 1083 aa19.97■□□□□ 0.79
LSM5-204ENST00000409909 DLL1O00548 723 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 STBD1O95210 358 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 KRT2P35908 639 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 TMEM266Q2M3C6 531 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 MICALL1Q8N3F8 863 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 METTL13Q8N6R0 699 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 TMEM40Q8WWA1 233 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 YME1L1Q96TA2 773 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 C17orf80Q9BSJ5 609 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 SUGCTQ9HAC7 445 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 NRBP2Q9NSY0 501 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 CEP131Q9UPN4 1083 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 TTC3P53804 2025 aa19.96■□□□□ 0.79
LSM5-204ENST00000409909 EML1O00423 815 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 CCNT1O60563 726 aaKnown RBP19.95■□□□□ 0.78
LSM5-204ENST00000409909 VTNP04004 478 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 GCFC2P16383 781 aaKnown RBP19.95■□□□□ 0.78
LSM5-204ENST00000409909 FOSBP53539 338 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 LINC01465Q8N7H1 131 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 GDPD5Q8WTR4 605 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 HAS1Q92839 578 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 FAM20AQ96MK3 541 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 PPP1R16BQ96T49 567 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 TMX1Q9H3N1 280 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 VAV3Q9UKW4 847 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 GINS2Q9Y248 185 aa19.95■□□□□ 0.78
LSM5-204ENST00000409909 COL4A4P53420 1690 aaPredicted RBP19.94■□□□□ 0.78
LSM5-204ENST00000409909 BTBD18B2RXH4 712 aa19.94■□□□□ 0.78
LSM5-204ENST00000409909 GPR32O75388 356 aa19.94■□□□□ 0.78
LSM5-204ENST00000409909 MMP1P03956 469 aa19.94■□□□□ 0.78
LSM5-204ENST00000409909 CLCN3P51790 818 aa19.94■□□□□ 0.78
LSM5-204ENST00000409909 PAK2Q13177 524 aa19.94■□□□□ 0.78
LSM5-204ENST00000409909 TARBP2Q15633 366 aaKnown RBP19.94■□□□□ 0.78
LSM5-204ENST00000409909 KIZQ2M2Z5 673 aa19.94■□□□□ 0.78
LSM5-204ENST00000409909 EFCAB12Q6NXP0 572 aa19.94■□□□□ 0.78
LSM5-204ENST00000409909 CCDC83Q8IWF9 413 aa19.94■□□□□ 0.78
LSM5-204ENST00000409909 CRIPAKQ8N1N5 446 aa19.94■□□□□ 0.78
LSM5-204ENST00000409909 NOC2LQ9Y3T9 749 aaKnown RBP19.94■□□□□ 0.78
LSM5-204ENST00000409909 TMEM150BA6NC51 233 aa19.93■□□□□ 0.78
LSM5-204ENST00000409909 MAGEB2O15479 319 aa19.93■□□□□ 0.78
LSM5-204ENST00000409909 GTPBP6O43824 516 aaPredicted RBP19.93■□□□□ 0.78
LSM5-204ENST00000409909 RBM25P49756 843 aaKnown RBP19.93■□□□□ 0.78
LSM5-204ENST00000409909 PPP2R5CQ13362 524 aa19.93■□□□□ 0.78
LSM5-204ENST00000409909 POTEDQ86YR6 584 aa19.93■□□□□ 0.78
LSM5-204ENST00000409909 LRRC71Q8N4P6 559 aa19.93■□□□□ 0.78
LSM5-204ENST00000409909 BANK1Q8NDB2 785 aa19.93■□□□□ 0.78
LSM5-204ENST00000409909 CEP89Q96ST8 783 aa19.93■□□□□ 0.78
LSM5-204ENST00000409909 FTHL17Q9BXU8 183 aa19.93■□□□□ 0.78
LSM5-204ENST00000409909 NIFKQ9BYG3 293 aaKnown RBP19.93■□□□□ 0.78
LSM5-204ENST00000409909 TSPYL2Q9H2G4 693 aaPredicted RBP19.93■□□□□ 0.78
LSM5-204ENST00000409909 RC3H2Q9HBD1 1191 aaKnown RBP19.93■□□□□ 0.78
LSM5-204ENST00000409909 ERVK-5Q9HDB9 667 aa19.93■□□□□ 0.78
LSM5-204ENST00000409909 TTC28Q96AY4 2481 aa19.92■□□□□ 0.78
LSM5-204ENST00000409909 COL4A6Q14031 1691 aa19.92■□□□□ 0.78
LSM5-204ENST00000409909 TBX3O15119 743 aa19.92■□□□□ 0.78
LSM5-204ENST00000409909 CRYBB1P53674 252 aaPredicted RBP19.92■□□□□ 0.78
LSM5-204ENST00000409909 NFX1Q12986 1120 aaKnown RBP19.92■□□□□ 0.78
LSM5-204ENST00000409909 XKR3Q5GH77 459 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms