RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 CEP72Q9P209 647 aa3.48□□□□□ -1.85
RGPD3-202ENST00000409886 CDC23Q9UJX2 597 aa3.48□□□□□ -1.85
RGPD3-202ENST00000409886 TCF20Q9UGU0 1960 aaKnown RBP3.48□□□□□ -1.85
RGPD3-202ENST00000409886 TRIP11Q15643 1979 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 MYOCOSA0A1B0GUC4 107 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 SPDYE2BA6NHP3 402 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 O00370 1275 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 CLTBP09497 229 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 SPDYE6P0CI01 402 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 CDK11BP21127 795 aaKnown RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 TXLNAP40222 546 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 SHC2P98077 582 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 PLOD1Q02809 727 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 STK4Q13043 487 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 PABPC4Q13310 644 aaKnown RBP eCLIP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 GNL2Q13823 731 aaKnown RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 CCNI2Q6ZMN8 369 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 COPS6Q7L5N1 327 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ERICH1Q86X53 443 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 PHOSPHO2Q8TCD6 241 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 IGDCC4Q8TDY8 1250 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 HNRNPLLQ8WVV9 542 aaKnown RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 TEPSINQ96N21 525 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 NEK1Q96PY6 1258 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 EPAS1Q99814 870 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 BAG1Q99933 345 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 RTKNQ9BST9 563 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ZNF341Q9BYN7 854 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 PBX4Q9BYU1 374 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 TMEM165Q9HC07 324 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ANKFY1Q9P2R3 1169 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 LCTP09848 1927 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 PCNX1Q96RV3 2341 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 HEATR5BQ9P2D3 2071 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 A0A1B0GTH6 734 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ATP2C2O75185 946 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 FECHP22830 423 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 GRIA2P42262 883 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 MATR3P43243 847 aaKnown RBP eCLIP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 AARSP49588 968 aaKnown RBP eCLIP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ERVK-9P63128 1117 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 FAM193AP78312 1265 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 STIM1Q13586 685 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 DLGAP5Q15398 846 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 SAFBQ15424 915 aaKnown RBP eCLIP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 C3orf67Q6ZVT6 689 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ANKS1BQ7Z6G8 1248 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 MICU3Q86XE3 530 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 CFAP53Q96M91 514 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 SLC39A2Q9NP94 309 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 METTL5Q9NRN9 209 aaKnown RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 FBXO2Q9UK22 296 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 NF1P21359 2839 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 INTS1Q8N201 2190 aaKnown RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ZNF292O60281 2723 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 PRR5-ARHGAP8B1AHC4 643 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 G3V3G9 751 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 PFKFB2O60825 505 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 AFMP43652 599 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ARHGAP8P85298 464 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 SHROOM1Q2M3G4 852 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 HSF5Q4G112 596 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 DCAF8Q5TAQ9 597 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 KIAA0319Q5VV43 1072 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 LLGL2Q6P1M3 1020 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 MICALCLQ6ZW33 695 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ZNF317Q96PQ6 595 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 APBA2Q99767 749 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 SELENOOQ9BVL4 669 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 PSD3Q9NYI0 1048 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 CPA4Q9UI42 421 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 MCM8Q9UJA3 840 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 CAPN7Q9Y6W3 813 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 TMEM221A6NGB7 291 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 GNAT3A8MTJ3 354 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 M0R296 226 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ENTPD3O75355 529 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 GMPRP36959 345 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 GRM5P41594 1212 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 IFI35P80217 286 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 SLC39A14Q15043 492 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 MB21D2Q8IYB1 491 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 GRIN3AQ8TCU5 1115 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 NSMCE1Q8WV22 266 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 ATOH1Q92858 354 aaPredicted RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 FAM167BQ9BTA0 163 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 CELF4Q9BZC1 486 aaKnown RBP3.47□□□□□ -1.85
RGPD3-202ENST00000409886 PCMTD2Q9NV79 361 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 HAUS2Q9NVX0 235 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 SERPINA10Q9UK55 444 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 MED13Q9UHV7 2174 aa3.47□□□□□ -1.85
RGPD3-202ENST00000409886 B4E1Z4 1266 aa3.46□□□□□ -1.85
RGPD3-202ENST00000409886 SPTLC2O15270 562 aa3.46□□□□□ -1.85
RGPD3-202ENST00000409886 SORBS2O94875 1100 aaKnown RBP3.46□□□□□ -1.85
RGPD3-202ENST00000409886 TAL1P17542 331 aaPredicted RBP3.46□□□□□ -1.85
RGPD3-202ENST00000409886 MYO1EQ12965 1108 aa3.46□□□□□ -1.85
RGPD3-202ENST00000409886 RNF220Q5VTB9 566 aa3.46□□□□□ -1.85
RGPD3-202ENST00000409886 OLFML2BQ68BL8 750 aa3.46□□□□□ -1.85
RGPD3-202ENST00000409886 SPDYE1Q8NFV5 336 aaPredicted RBP3.46□□□□□ -1.85
RGPD3-202ENST00000409886 UHMK1Q8TAS1 419 aaKnown RBP3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms