RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TTLL4Q14679 1199 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 MGAT5BQ3V5L5 792 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 SUSD4Q5VX71 490 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 TTC23LQ6PF05 361 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 LRRC31Q6UY01 552 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 SMYD3Q9H7B4 428 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 E2F8A0AVK6 867 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 HLFQ16534 295 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 CCDC38Q502W7 563 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 SLC26A7Q8TE54 656 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 L3MBTL3Q96JM7 780 aaPredicted RBP9.02□□□□□ -0.97
SCN9A-203ENST00000409672 HOXC10Q9NYD6 342 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 TJP2Q9UDY2 1190 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 PLA2G4BP0C869 781 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 SPDYAQ5MJ70 313 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 SDE2Q6IQ49 451 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 NUDT18Q6ZVK8 323 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 ZNF302Q9NR11 478 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 SLC16A4O15374 487 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 E2F6O75461 281 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 OAS2P29728 719 aaKnown RBP9.02□□□□□ -0.97
SCN9A-203ENST00000409672 ST8SIA6P61647 398 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 IL31Q6EBC2 164 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 CACUL1Q86Y37 369 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 SGSM2O43147 1006 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 PDGFRBP09619 1106 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 PPARGP37231 505 aaPredicted RBP9.02□□□□□ -0.97
SCN9A-203ENST00000409672 BBS9Q3SYG4 887 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 GPATCH4Q5T3I0 446 aaKnown RBP9.02□□□□□ -0.97
SCN9A-203ENST00000409672 TMEM94Q12767 1356 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L5A8MUK1 530 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 MTMR2Q13614 643 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 MAPK6Q16659 721 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.02□□□□□ -0.97
SCN9A-203ENST00000409672 SPATA2LQ8IUW3 424 aaPredicted RBP9.02□□□□□ -0.97
SCN9A-203ENST00000409672 EPAS1Q99814 870 aa9.02□□□□□ -0.97
SCN9A-203ENST00000409672 CDV3Q9UKY7 258 aaKnown RBP9.02□□□□□ -0.97
SCN9A-203ENST00000409672 ARHGAP10A1A4S6 786 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 ARHGEF37A1IGU5 675 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 PAMP19021 973 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 DNAJB2P25686 324 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 PCSK7Q16549 785 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 IL17REQ8NFR9 667 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 OR8K1Q8NGG5 319 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 MAP3K20Q9NYL2 800 aaKnown RBP9.01□□□□□ -0.97
SCN9A-203ENST00000409672 PASKQ96RG2 1323 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 MLH3Q9UHC1 1453 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 AKT1P31749 480 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 HMGCS2P54868 508 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 TUBGCP2Q9BSJ2 902 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 DSCC1Q9BVC3 393 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 DYNC1LI2O43237 492 aaPredicted RBP9.01□□□□□ -0.97
SCN9A-203ENST00000409672 STAT3P40763 770 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 MAPK9P45984 424 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 GNGT1P63211 74 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 PRKCQQ04759 706 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 FAM133BQ5BKY9 247 aaKnown RBP9.01□□□□□ -0.97
SCN9A-203ENST00000409672 SLC44A5Q8NCS7 719 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 BEST2Q8NFU1 509 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 GABBR1Q9UBS5 961 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 PCDHA6Q9UN73 950 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 PCDHA8Q9Y5H6 950 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 MTMR3Q13615 1198 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 RFX8Q6ZV50 586 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 OR6P1Q8NGX9 317 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 TSC1Q92574 1164 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 SAAL1Q96ER3 474 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 CDHR1Q96JP9 859 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 AGAP3Q96P47 875 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 POLR3CQ9BUI4 534 aaPredicted RBP9.01□□□□□ -0.97
SCN9A-203ENST00000409672 RNF123Q5XPI4 1314 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 SKAP2O75563 359 aaPredicted RBP9.01□□□□□ -0.97
SCN9A-203ENST00000409672 SEPT2Q15019 361 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 DEFB128Q7Z7B8 93 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 PPP2R3CQ969Q6 453 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 CAPN11Q9UMQ6 739 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 EAF2Q96CJ1 260 aaPredicted RBP9.01□□□□□ -0.97
SCN9A-203ENST00000409672 CCDC17Q96LX7 622 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 PPIEQ9UNP9 301 aaKnown RBP9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L15C9J2P7 530 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L13C9JLJ4 530 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L11C9JVI0 530 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L18D6R9N7 530 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L22D6RA61 530 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L17D6RBQ6 530 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L19D6RCP7 530 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L20D6RJB6 530 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 NFKBIAP25963 317 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L24Q0WX57 530 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 AARS2Q5JTZ9 985 aaKnown RBP9.01□□□□□ -0.97
SCN9A-203ENST00000409672 LMBRD2Q68DH5 695 aaPredicted RBP9.01□□□□□ -0.97
SCN9A-203ENST00000409672 USP17L6PQ6QN14 398 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 RGL1Q9NZL6 768 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 BCAP29Q9UHQ4 241 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 ZKSCAN5Q9Y2L8 839 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 M0QYV0 167 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 ACSL3O95573 720 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 ADRA2BP18089 450 aa9.01□□□□□ -0.97
SCN9A-203ENST00000409672 ATP5JP18859 108 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms