RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ERVK-5Q9HDB9 667 aa14.78□□□□□ -0.04
CHRNA1-203ENST00000409219 NGRNQ9NPE2 291 aaKnown RBP14.78□□□□□ -0.04
CHRNA1-203ENST00000409219 PKD2L1Q9P0L9 805 aa14.78□□□□□ -0.04
CHRNA1-203ENST00000409219 C9IYK1 514 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 MEIS2O14770 477 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 FGFR1P11362 822 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 SDSP20132 328 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 PDE4AP27815 886 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 KRT76Q01546 638 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 ITIH3Q06033 890 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 ANGPT1Q15389 498 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 CES5AQ6NT32 575 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 CCDC105Q8IYK2 499 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 TDRD5Q8NAT2 981 aaKnown RBP14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 FLCNQ8NFG4 579 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 SMARCC2Q8TAQ2 1214 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 TMEM40Q8WWA1 233 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 RILPL2Q969X0 211 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 RGS18Q9NS28 235 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 PCDHA2Q9Y5H9 948 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 CEP250Q9BV73 2442 aa14.77□□□□□ -0.04
CHRNA1-203ENST00000409219 FRYLO94915 3013 aa14.77□□□□□ -0.05
CHRNA1-203ENST00000409219 SMIM35A0A1B0GVV1 85 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 PI15O43692 258 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 WEE2P0C1S8 567 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 ITGB5P18084 799 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 AOC1P19801 751 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 PBX3P40426 434 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 SLC24A5Q71RS6 500 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 ZDHHC14Q8IZN3 488 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 PIBF1Q8WXW3 757 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 CDHR1Q96JP9 859 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 DSCC1Q9BVC3 393 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 C1orf112Q9NSG2 853 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 PUF60Q9UHX1 559 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 NOC2LQ9Y3T9 749 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 DENND3A2RUS2 1198 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 PIK3CDO00329 1044 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 RPS6KA5O75582 802 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 NPR3P17342 541 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 MTHFRP42898 656 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 PLCB4Q15147 1175 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 CWC27Q6UX04 472 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 DGLUCYQ7Z3D6 616 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 CDHR5Q9HBB8 845 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 SENP2Q9HC62 589 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 LIMD1Q9UGP4 676 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 GINS2Q9Y248 185 aa14.76□□□□□ -0.05
CHRNA1-203ENST00000409219 TPRP12270 2363 aaKnown RBP14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 KMT2BQ9UMN6 2715 aaPredicted RBP14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 EVPLQ92817 2033 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 OTOGLQ3ZCN5 2332 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 KRT37O76014 449 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 MTMR1Q13613 665 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 KIAA1841Q6NSI8 718 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 KCNT2Q6UVM3 1135 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 LRRC55Q6ZSA7 311 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 TMC7Q7Z402 723 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 CUL5Q93034 780 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 ATP6V0A4Q9HBG4 840 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 RNF216Q9NWF9 866 aaPredicted RBP14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 TMEM161AQ9NX61 479 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 ST3GAL5Q9UNP4 418 aa14.75□□□□□ -0.05
CHRNA1-203ENST00000409219 PPM1AP35813 382 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 TROAPQ12815 778 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 RARS2Q5T160 578 aaKnown RBP14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 MTHFD1LQ6UB35 978 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 NME8Q8N427 588 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 DTWD2Q8NBA8 298 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 ZNF558Q96NG5 402 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 TMEM117Q9H0C3 514 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 AZI2Q9H6S1 392 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 JPH1Q9HDC5 661 aaPredicted RBP14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 RNF19AQ9NV58 838 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 USTQ9Y2C2 406 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 UBIAD1Q9Y5Z9 338 aa14.74□□□□□ -0.05
CHRNA1-203ENST00000409219 C2orf71A6NGG8 1288 aa14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 CLASP2O75122 1294 aaKnown RBP14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 LMNAP02545 664 aaKnown RBP14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 SMC1AQ14683 1233 aaKnown RBP14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 KANK3Q6NY19 840 aa14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 FAM43BQ6ZT52 329 aaPredicted RBP14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 FAM228AQ86W67 206 aa14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 KIAA2013Q8IYS2 634 aa14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 PLCD3Q8N3E9 789 aa14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 C12orf76Q8N812 135 aaPredicted RBP14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 MRPL43Q8N983 215 aaKnown RBP14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 FEZF2Q8TBJ5 459 aa14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 CASD1Q96PB1 797 aa14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 ELAC1Q9H777 363 aaKnown RBP14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 SLC9A2Q9UBY0 812 aa14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 DBR1Q9UK59 544 aaKnown RBP14.73□□□□□ -0.05
CHRNA1-203ENST00000409219 FANCMQ8IYD8 2048 aa14.72□□□□□ -0.05
CHRNA1-203ENST00000409219 C2orf16Q68DN1 1984 aa14.72□□□□□ -0.05
CHRNA1-203ENST00000409219 EOMESO95936 686 aa14.72□□□□□ -0.05
CHRNA1-203ENST00000409219 FAM189BP81408 668 aa14.72□□□□□ -0.05
CHRNA1-203ENST00000409219 KRT17Q04695 432 aa14.72□□□□□ -0.05
CHRNA1-203ENST00000409219 LRRC43Q8N309 656 aa14.72□□□□□ -0.05
CHRNA1-203ENST00000409219 TNPO1Q92973 898 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms