RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 UCHL3P15374 230 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 SOX10P56693 466 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 KCNB1Q14721 858 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 LONRF1Q17RB8 773 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 FAM186BQ8IYM0 893 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 ATG4AQ8WYN0 398 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 KAT5Q92993 513 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 BICD1Q96G01 975 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 DNAJC12Q9UKB3 198 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 GOLGA8SH3BPF8 625 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 GOLGA8MH3BSY2 632 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 CAND2O75155 1236 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 RAD17O75943 681 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 AKAP3O75969 853 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 IFNB1P01574 187 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 DRAP1Q14919 205 aaPredicted RBP9.05□□□□□ -0.96
SNX13-201ENST00000409076 PALB2Q86YC2 1186 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 EPS8L3Q8TE67 593 aaKnown RBP9.05□□□□□ -0.96
SNX13-201ENST00000409076 SLC20A1Q8WUM9 679 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 SCFD1Q8WVM8 642 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 C18orf8Q96DM3 657 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 RPGRIP1Q96KN7 1286 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 ATP6V1G3Q96LB4 118 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 UBXN6Q9BZV1 441 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 NYXQ9GZU5 481 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 MYH7P12883 1935 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 ANO9A1A5B4 782 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 K7ENM7 598 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 SLC20A2Q08357 652 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 TMEM132AQ24JP5 1023 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 HS2ST1Q7LGA3 356 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 FAM178BQ8IXR5 827 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 MYCBPAPQ8TBZ2 947 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 DYDC2Q96IM9 177 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 PRMT1Q99873 361 aaKnown RBP9.05□□□□□ -0.96
SNX13-201ENST00000409076 C7orf25Q9BPX7 421 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 TDRD3Q9H7E2 651 aaKnown RBP9.05□□□□□ -0.96
SNX13-201ENST00000409076 ANAPC4Q9UJX5 808 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 L3MBTL1Q9Y468 752 aa9.05□□□□□ -0.96
SNX13-201ENST00000409076 A0A1W2PRG0 241 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 PALM3A6NDB9 673 aaPredicted RBP9.04□□□□□ -0.96
SNX13-201ENST00000409076 POC1B-GALNT4F8VUJ3 575 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 NEBLO76041 1014 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 NR3C1P04150 777 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 IFI35P80217 286 aaPredicted RBP9.04□□□□□ -0.96
SNX13-201ENST00000409076 ICA1Q05084 483 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 SPRED3Q2MJR0 410 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 DENND2CQ68D51 928 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 MCTP2Q6DN12 878 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 EMBQ6PCB8 327 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 ZMYND12Q9H0C1 365 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 INTUQ9ULD6 942 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 RABGAP1Q9Y3P9 1069 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 DAGLAQ9Y4D2 1042 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 TUBBP07437 444 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 MMEP08473 750 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 SCP2P22307 547 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 MDH1P40925 334 aaKnown RBP9.04□□□□□ -0.96
SNX13-201ENST00000409076 CERKLQ49MI3 558 aaPredicted RBP9.04□□□□□ -0.96
SNX13-201ENST00000409076 ZNF394Q53GI3 561 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 CENPPQ6IPU0 288 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 ZNF449Q6P9G9 518 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 GUF1Q8N442 669 aaKnown RBP9.04□□□□□ -0.96
SNX13-201ENST00000409076 CCDC26Q8TAB7 109 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 BAP1Q92560 729 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 CYFIP2Q96F07 1278 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 FMO2Q99518 471 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 PI4K2AQ9BTU6 479 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 THAP2Q9H0W7 228 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 PSD3Q9NYI0 1048 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 CEP72Q9P209 647 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 CTNNAL1Q9UBT7 734 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 CNOT8Q9UFF9 292 aaKnown RBP9.04□□□□□ -0.96
SNX13-201ENST00000409076 PPP1R9AQ9ULJ8 1098 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 KIF13AQ9H1H9 1805 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 PPP1R11O60927 126 aaPredicted RBP9.04□□□□□ -0.96
SNX13-201ENST00000409076 SPAG7O75391 227 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 GH2P01242 217 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 DGKZQ13574 1117 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 SLC18A3Q16572 532 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 PTGISQ16647 500 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 CATSPER3Q86XQ3 398 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 SLC17A8Q8NDX2 589 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 ERMNQ8TAM6 284 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 SLC35G2Q8TBE7 412 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 ARHGEF26Q96DR7 871 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 ERGIC2Q96RQ1 377 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 DAAM1Q9Y4D1 1078 aa9.04□□□□□ -0.96
SNX13-201ENST00000409076 F5H423 210 aaPredicted RBP9.03□□□□□ -0.96
SNX13-201ENST00000409076 GJB6O95452 261 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 TTLL1O95922 423 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 DYNLT1P63172 113 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 ARHGAP4P98171 946 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 MYO1EQ12965 1108 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 CCDC13Q8IYE1 715 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 USP38Q8NB14 1042 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 ZSWIM2Q8NEG5 633 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 ANKS1AQ92625 1134 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 PRCCQ92733 491 aaPredicted RBP9.03□□□□□ -0.96
SNX13-201ENST00000409076 TAF1DQ9H5J8 278 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms