RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ICA1LQ8NDH6 482 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 PDP2Q9P2J9 529 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 CCDC22O60826 627 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 KRT37O76014 449 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 CTDNEP1O95476 244 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
SMPD4-202ENST00000409031 MED21Q13503 144 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 BBS9Q3SYG4 887 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 TMCO4Q5TGY1 634 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 HIC2Q96JB3 615 aa18.97■□□□□ 0.63
SMPD4-202ENST00000409031 FOXP2O15409 715 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 GSTA2P09210 222 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 NQO1P15559 274 aaKnown RBP18.96■□□□□ 0.63
SMPD4-202ENST00000409031 GPC5P78333 572 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 STAT4Q14765 748 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 TRMT10CQ7L0Y3 403 aaKnown RBP18.96■□□□□ 0.63
SMPD4-202ENST00000409031 HIPK4Q8NE63 616 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 RFFLQ8WZ73 363 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 PFDN4Q9NQP4 134 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 A0A1W2PQJ5 194 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 H7C0C1 242 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 TOM1L1O75674 476 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 CFBP00751 764 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 ANXA13P27216 316 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 GYG1P46976 350 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 ATP5OP48047 213 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 SERPINB4P48594 390 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 KRT81Q14533 505 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 USH1GQ495M9 461 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 RASSF3Q86WH2 238 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 ZNF354CQ86Y25 554 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 KIF2BQ8N4N8 673 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 CABLES1Q8TDN4 633 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 TTI1O43156 1089 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 ACADSP16219 412 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 PFKFB3Q16875 520 aaPredicted RBP18.96■□□□□ 0.63
SMPD4-202ENST00000409031 ROPN1BQ9BZX4 212 aaPredicted RBP18.96■□□□□ 0.63
SMPD4-202ENST00000409031 ROPN1Q9HAT0 212 aaPredicted RBP18.96■□□□□ 0.63
SMPD4-202ENST00000409031 PAPOLBQ9NRJ5 636 aaKnown RBP18.96■□□□□ 0.63
SMPD4-202ENST00000409031 TRAF3IP3Q9Y228 551 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 DDX39AO00148 427 aaKnown RBP18.96■□□□□ 0.63
SMPD4-202ENST00000409031 GHRP10912 638 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 MARK3P27448 753 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 PGM1P36871 562 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 ERVK-24P63145 666 aa18.96■□□□□ 0.63
SMPD4-202ENST00000409031 ZNF211Q13398 564 aaPredicted RBP18.96■□□□□ 0.63
SMPD4-202ENST00000409031 PIH1D3Q9NQM4 214 aaKnown RBP18.96■□□□□ 0.63
SMPD4-202ENST00000409031 MLH3Q9UHC1 1453 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 PRAMEF22A3QJZ6 481 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 CDH16O75309 829 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 HSD17B3P37058 310 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 USP38Q8NB14 1042 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 DNAJC12Q9UKB3 198 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 SLC4A7Q9Y6M7 1214 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 H7C1W4 665 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 EEF1DP29692 281 aaKnown RBP18.95■□□□□ 0.62
SMPD4-202ENST00000409031 ANKRD40Q6AI12 368 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 CAVIN3Q969G5 261 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 APOBEC2Q9Y235 224 aaKnown RBP18.95■□□□□ 0.62
SMPD4-202ENST00000409031 NEDD4P46934 1319 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 COPEO14579 308 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 NCF2P19878 526 aaPredicted RBP18.95■□□□□ 0.62
SMPD4-202ENST00000409031 PAPOLAP51003 745 aaKnown RBP18.95■□□□□ 0.62
SMPD4-202ENST00000409031 ART3Q13508 389 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 RAPGEF5Q92565 580 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 ERP27Q96DN0 273 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.95■□□□□ 0.62
SMPD4-202ENST00000409031 TTC36A6NLP5 189 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 RGS9BPQ6ZS82 235 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 MIEF2Q96C03 454 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 DMGDHQ9UI17 866 aaKnown RBP18.95■□□□□ 0.62
SMPD4-202ENST00000409031 PALLDQ8WX93 1383 aa18.95■□□□□ 0.62
SMPD4-202ENST00000409031 KLHL38Q2WGJ6 581 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 FRMPD2Q68DX3 1309 aaPredicted RBP18.94■□□□□ 0.62
SMPD4-202ENST00000409031 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 PFASO15067 1338 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 PAX7P23759 505 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 SP4Q02446 784 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 ASPRV1Q53RT3 343 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 CCDC138Q96M89 665 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 SMARCAL1Q9NZC9 954 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 UGGT1Q9NYU2 1555 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 KRT1P04264 644 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 DLATP10515 647 aaKnown RBP18.94■□□□□ 0.62
SMPD4-202ENST00000409031 VHLP40337 213 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 PCYT1AP49585 367 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 RINT1Q6NUQ1 792 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 C16orf87Q6PH81 154 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 SMG5Q9UPR3 1016 aaKnown RBP18.94■□□□□ 0.62
SMPD4-202ENST00000409031 ARL4CP56559 192 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 BASP1P80723 227 aaKnown RBP18.94■□□□□ 0.62
SMPD4-202ENST00000409031 DGKHQ86XP1 1220 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 TTC16Q8NEE8 873 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 TMBIM4Q9HC24 238 aa18.94■□□□□ 0.62
SMPD4-202ENST00000409031 MXI1P50539 228 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 CYLC2Q14093 348 aaPredicted RBP18.93■□□□□ 0.62
SMPD4-202ENST00000409031 LRRC43Q8N309 656 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 CPDO75976 1380 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 TOM1O60784 492 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms