RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 ARHGEF6Q15052 776 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 NFIL3Q16649 462 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 EDRF1Q3B7T1 1238 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 SLC9C1Q4G0N8 1177 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 TCP11X2Q5H9J9 407 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 METTL7BQ6UX53 244 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 EPM2AIP1Q7L775 607 aaPredicted RBP10.84□□□□□ -0.67
POLR1A-202ENST00000409024 ZSCAN30Q86W11 494 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 EXOC8Q8IYI6 725 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 TRMT44Q8IYL2 757 aaKnown RBP10.84□□□□□ -0.67
POLR1A-202ENST00000409024 FAM43AQ8N2R8 423 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 CSGALNACT2Q8N6G5 542 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 ANKRD13CQ8N6S4 541 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 ZNF507Q8TCN5 953 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 PIGOQ8TEQ8 1089 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 ZFP91Q96JP5 570 aaPredicted RBP10.84□□□□□ -0.67
POLR1A-202ENST00000409024 TRIM47Q96LD4 638 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 DRC1Q96MC2 740 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 CCDC43Q96MW1 224 aaKnown RBP10.84□□□□□ -0.67
POLR1A-202ENST00000409024 UIMC1Q96RL1 719 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 PTPN18Q99952 460 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 PARVGQ9HBI0 331 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 VTA1Q9NP79 307 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 LARSQ9P2J5 1176 aaKnown RBP10.84□□□□□ -0.67
POLR1A-202ENST00000409024 CGNQ9P2M7 1197 aaKnown RBP10.84□□□□□ -0.67
POLR1A-202ENST00000409024 PCDHB13Q9Y5F0 798 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 LCTP09848 1927 aa10.84□□□□□ -0.67
POLR1A-202ENST00000409024 RBM47A0AV96 593 aaKnown RBP10.83□□□□□ -0.68
POLR1A-202ENST00000409024 KCNJ18B7U540 433 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 PDXKO00764 312 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 NRDCO43847 1150 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 SLC26A2P50443 739 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 RTP1P59025 263 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 SNRPFP62306 86 aaKnown RBP10.83□□□□□ -0.68
POLR1A-202ENST00000409024 SP3Q02447 781 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 MYBPC2Q14324 1141 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 GRB14Q14449 540 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 KCNJ12Q14500 433 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 TTLL4Q14679 1199 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 XKR3Q5GH77 459 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 FAM160B1Q5W0V3 765 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 ANKRD40Q6AI12 368 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 PADI6Q6TGC4 694 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 SEPT14Q6ZU15 432 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 PLEKHH3Q7Z736 793 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 FILIP1Q7Z7B0 1213 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 VSTM4Q8IW00 320 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 ZC3H3Q8IXZ2 948 aaKnown RBP10.83□□□□□ -0.68
POLR1A-202ENST00000409024 CCDC150Q8NCX0 1101 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 BANK1Q8NDB2 785 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 GOLGA5Q8TBA6 731 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 AFAP1L1Q8TED9 768 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 TMEM174Q8WUU8 243 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 SEPT1Q8WYJ6 367 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 KCNN1Q92952 543 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 IQCDQ96DY2 449 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 FGD4Q96M96 766 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 DUSP9Q99956 384 aaKnown RBP10.83□□□□□ -0.68
POLR1A-202ENST00000409024 RUSC1Q9BVN2 902 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 SRRTQ9BXP5 876 aaKnown RBP10.83□□□□□ -0.68
POLR1A-202ENST00000409024 PORCNQ9H237 461 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 SEMA6BQ9H3T3 888 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 ST6GALNAC4Q9H4F1 302 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 RTN4Q9NQC3 1192 aaKnown RBP10.83□□□□□ -0.68
POLR1A-202ENST00000409024 PKD2L1Q9P0L9 805 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 WRAP73Q9P2S5 460 aaPredicted RBP10.83□□□□□ -0.68
POLR1A-202ENST00000409024 DDX41Q9UJV9 622 aaKnown RBP10.83□□□□□ -0.68
POLR1A-202ENST00000409024 TRAF3IP3Q9Y228 551 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 ZKSCAN5Q9Y2L8 839 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 MAFBQ9Y5Q3 323 aaPredicted RBP10.83□□□□□ -0.68
POLR1A-202ENST00000409024 ITIH6Q6UXX5 1313 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 ADGRA2Q96PE1 1338 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 IGSF9BQ9UPX0 1349 aa10.83□□□□□ -0.68
POLR1A-202ENST00000409024 ZNF236Q9UL36 1845 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 H0YCG3 227 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 CALUO43852 315 aaPredicted RBP10.82□□□□□ -0.68
POLR1A-202ENST00000409024 DGAT1O75907 488 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
POLR1A-202ENST00000409024 UBA1P22314 1058 aaKnown RBP10.82□□□□□ -0.68
POLR1A-202ENST00000409024 RPL13P26373 211 aaKnown RBP10.82□□□□□ -0.68
POLR1A-202ENST00000409024 ADORA2AP29274 412 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 MARSP56192 900 aaKnown RBP10.82□□□□□ -0.68
POLR1A-202ENST00000409024 TRIM14Q14142 442 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 KNOP1Q1ED39 458 aaKnown RBP10.82□□□□□ -0.68
POLR1A-202ENST00000409024 ZCWPW2Q504Y3 356 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 WDR78Q5VTH9 848 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 CCDC62Q6P9F0 684 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
POLR1A-202ENST00000409024 GPR142Q7Z601 462 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 SFR1Q86XK3 245 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 MCPH1Q8NEM0 835 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 SCFD2Q8WU76 684 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 SCFD1Q8WVM8 642 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 KIFAP3Q92845 792 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 HVCN1Q96D96 273 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 FAM167AQ96KS9 214 aa10.82□□□□□ -0.68
POLR1A-202ENST00000409024 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
POLR1A-202ENST00000409024 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
POLR1A-202ENST00000409024 PRO3102Q9H379 93 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms