RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 EPC2Q52LR7 807 aa21.81■■□□□ 1.08
SMARCB1-204ENST00000407422 C22orf23Q9BZE7 217 aa21.81■■□□□ 1.08
SMARCB1-204ENST00000407422 DISC1Q9NRI5 854 aa21.81■■□□□ 1.08
SMARCB1-204ENST00000407422 GINS2Q9Y248 185 aa21.81■■□□□ 1.08
SMARCB1-204ENST00000407422 COL4A6Q14031 1691 aa21.81■■□□□ 1.08
SMARCB1-204ENST00000407422 BDP1A6H8Y1 2624 aa21.81■■□□□ 1.08
SMARCB1-204ENST00000407422 MYO7AQ13402 2215 aa21.81■■□□□ 1.08
SMARCB1-204ENST00000407422 KDM3AQ9Y4C1 1321 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 WDR64B1ANS9 1081 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 GAS7O60861 476 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 CDKL5O76039 1030 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 CTDNEP1O95476 244 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 C22orf31O95567 290 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 Q4G0T1 1027 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 LRCH2Q5VUJ6 765 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 GALNT17Q6IS24 598 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 IL17RAQ96F46 866 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 RIT2Q99578 217 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 UNC45AQ9H3U1 944 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 LMCD1Q9NZU5 365 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 RALGAPA2Q2PPJ7 1873 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 CYP3A7-CYP3A51PA0A087WV96 503 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 ZNF862O60290 1169 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 SEC24BO95487 1268 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 CYP3A7P24462 503 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 PAK2Q13177 524 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 UGCGQ16739 394 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 FAM177A1Q8N128 213 aaPredicted RBP21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 PPP1R16BQ96T49 567 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 PHF20Q9BVI0 1012 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 TMX1Q9H3N1 280 aa21.8■■□□□ 1.08
SMARCB1-204ENST00000407422 STK36Q9NRP7 1315 aa21.79■■□□□ 1.08
SMARCB1-204ENST00000407422 INF2Q27J81 1249 aa21.79■■□□□ 1.08
SMARCB1-204ENST00000407422 TMEM192Q8IY95 271 aa21.79■■□□□ 1.08
SMARCB1-204ENST00000407422 METTL13Q8N6R0 699 aa21.79■■□□□ 1.08
SMARCB1-204ENST00000407422 NECAB1Q8N987 351 aa21.79■■□□□ 1.08
SMARCB1-204ENST00000407422 TMEM40Q8WWA1 233 aa21.79■■□□□ 1.08
SMARCB1-204ENST00000407422 TEKT3Q9BXF9 490 aa21.79■■□□□ 1.08
SMARCB1-204ENST00000407422 RC3H2Q9HBD1 1191 aaKnown RBP21.79■■□□□ 1.08
SMARCB1-204ENST00000407422 PSMD10O75832 226 aa21.78■■□□□ 1.08
SMARCB1-204ENST00000407422 LARGE1O95461 756 aa21.78■■□□□ 1.08
SMARCB1-204ENST00000407422 NONOQ15233 471 aaKnown RBP eCLIP21.78■■□□□ 1.08
SMARCB1-204ENST00000407422 ANKRD1Q15327 319 aa21.78■■□□□ 1.08
SMARCB1-204ENST00000407422 MBOAT7Q96N66 472 aa21.78■■□□□ 1.08
SMARCB1-204ENST00000407422 FTHL17Q9BXU8 183 aa21.78■■□□□ 1.08
SMARCB1-204ENST00000407422 NOC2LQ9Y3T9 749 aaKnown RBP21.78■■□□□ 1.08
SMARCB1-204ENST00000407422 CENPBP07199 599 aaPredicted RBP21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 LINC00271P0C7V0 271 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 KCNQ1P51787 676 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 NFX1Q12986 1120 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 ME3Q16798 604 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 KIZQ2M2Z5 673 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 KRT25Q7Z3Z0 450 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 CRIPAKQ8N1N5 446 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 FIBCD1Q8N539 461 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 ETNPPLQ8TBG4 499 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 OXER1Q8TDS5 423 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 SAMD11Q96NU1 681 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 ADGRA3Q8IWK6 1321 aa21.77■■□□□ 1.08
SMARCB1-204ENST00000407422 DGKIO75912 1065 aa21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 VTNP04004 478 aa21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 OATP04181 439 aa21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 SFNP31947 248 aa21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 JAK3P52333 1124 aa21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 PRKCEQ02156 737 aa21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 ADAMTS19Q8TE59 1207 aa21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 ZNF689Q96CS4 500 aaPredicted RBP21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 FAM167AQ96KS9 214 aa21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 ORC3Q9UBD5 711 aaPredicted RBP21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 DDX25Q9UHL0 483 aaKnown RBP21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 CEP131Q9UPN4 1083 aa21.77■■□□□ 1.07
SMARCB1-204ENST00000407422 H3BNC9 293 aa21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 SLC37A4O43826 429 aa21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 FDPSP14324 419 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 CLCN3P51790 818 aa21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 GPM6BQ13491 265 aa21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 LETM2Q2VYF4 491 aa21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 MOXD1Q6UVY6 613 aa21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 B3GNT9Q6UX72 402 aa21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 OSMRQ99650 979 aa21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 ERVK-5Q9HDB9 667 aa21.76■■□□□ 1.07
SMARCB1-204ENST00000407422 CCDC194A0A1B0GVG4 234 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 MGEA5O60502 916 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 GPR32O75388 356 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 RPS6KA5O75582 802 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 BMP1P13497 986 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 MIER3Q7Z3K6 550 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 LRRC71Q8N4P6 559 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 HLA-CQ95604 372 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 NRBP2Q9NSY0 501 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 COG5Q9UP83 839 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 ATG2AQ2TAZ0 1938 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 KIAA1671Q9BY89 1806 aa21.75■■□□□ 1.07
SMARCB1-204ENST00000407422 MAGEB2O15479 319 aa21.74■■□□□ 1.07
SMARCB1-204ENST00000407422 XBP1P17861 261 aa21.74■■□□□ 1.07
SMARCB1-204ENST00000407422 CTNNB1P35222 781 aa21.74■■□□□ 1.07
SMARCB1-204ENST00000407422 NEK4P51957 841 aa21.74■■□□□ 1.07
SMARCB1-204ENST00000407422 BTG3Q14201 252 aaPredicted RBP21.74■■□□□ 1.07
SMARCB1-204ENST00000407422 EFCAB12Q6NXP0 572 aa21.74■■□□□ 1.07
SMARCB1-204ENST00000407422 LINC01465Q8N7H1 131 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms