RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 KLRC4O43908 158 aa22.77■■□□□ 1.24
CHKB-201ENST00000406938 KRT18P05783 430 aaKnown RBP22.77■■□□□ 1.24
CHKB-201ENST00000406938 HSPA1AP0DMV8 641 aaKnown RBP22.77■■□□□ 1.24
CHKB-201ENST00000406938 HSPA1BP0DMV9 641 aaKnown RBP22.77■■□□□ 1.24
CHKB-201ENST00000406938 BEX3Q00994 111 aa22.77■■□□□ 1.24
CHKB-201ENST00000406938 CACNB1Q02641 598 aaPredicted RBP22.77■■□□□ 1.24
CHKB-201ENST00000406938 TYRO3Q06418 890 aa22.77■■□□□ 1.24
CHKB-201ENST00000406938 PADI6Q6TGC4 694 aa22.77■■□□□ 1.24
CHKB-201ENST00000406938 C1orf186Q6ZWK4 172 aa22.77■■□□□ 1.24
CHKB-201ENST00000406938 SH3TC2Q8TF17 1288 aa22.77■■□□□ 1.24
CHKB-201ENST00000406938 CEP170P1Q96L14 293 aa22.77■■□□□ 1.24
CHKB-201ENST00000406938 KCND2Q9NZV8 630 aa22.77■■□□□ 1.24
CHKB-201ENST00000406938 MYH9P35579 1960 aaKnown RBP22.76■■□□□ 1.23
CHKB-201ENST00000406938 USO1O60763 962 aaKnown RBP22.76■■□□□ 1.23
CHKB-201ENST00000406938 C6orf222P0C671 652 aaPredicted RBP22.76■■□□□ 1.23
CHKB-201ENST00000406938 CCDC192P0DO97 292 aa22.76■■□□□ 1.23
CHKB-201ENST00000406938 GJA9P57773 515 aa22.76■■□□□ 1.23
CHKB-201ENST00000406938 PLCB4Q15147 1175 aa22.76■■□□□ 1.23
CHKB-201ENST00000406938 FSCN1Q16658 493 aaKnown RBP22.76■■□□□ 1.23
CHKB-201ENST00000406938 BRDTQ58F21 947 aaPredicted RBP22.76■■□□□ 1.23
CHKB-201ENST00000406938 ISM2Q6H9L7 571 aa22.76■■□□□ 1.23
CHKB-201ENST00000406938 ATP8B4Q8TF62 1192 aa22.76■■□□□ 1.23
CHKB-201ENST00000406938 REEP2Q9BRK0 252 aa22.76■■□□□ 1.23
CHKB-201ENST00000406938 UPF3AQ9H1J1 476 aaKnown RBP22.76■■□□□ 1.23
CHKB-201ENST00000406938 CYP26B1Q9NR63 512 aa22.76■■□□□ 1.23
CHKB-201ENST00000406938 ZNF215Q9UL58 517 aaPredicted RBP22.76■■□□□ 1.23
CHKB-201ENST00000406938 MYADML2A6NDP7 307 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 PGK1P00558 417 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 IDEP14735 1019 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 MTERF2Q49AM1 385 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 BBXQ8WY36 941 aaPredicted RBP22.75■■□□□ 1.23
CHKB-201ENST00000406938 NIFKQ9BYG3 293 aaKnown RBP22.75■■□□□ 1.23
CHKB-201ENST00000406938 XPNPEP3Q9NQH7 507 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 NRBP2Q9NSY0 501 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 DDX20Q9UHI6 824 aaKnown RBP22.75■■□□□ 1.23
CHKB-201ENST00000406938 ARID2Q68CP9 1835 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 GUCY2CP25092 1073 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 LBX1P52954 281 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 GIT2Q14161 759 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 STX1AQ16623 288 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 KMT5BQ4FZB7 885 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 UNC13DQ70J99 1090 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 RMND1Q9NWS8 449 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 TRPC6Q9Y210 931 aa22.75■■□□□ 1.23
CHKB-201ENST00000406938 PVALEFA0A1B0GWK0 134 aa22.74■■□□□ 1.23
CHKB-201ENST00000406938 H3BRB1 525 aa22.74■■□□□ 1.23
CHKB-201ENST00000406938 MORC3Q14149 939 aa22.74■■□□□ 1.23
CHKB-201ENST00000406938 KCNB1Q14721 858 aa22.74■■□□□ 1.23
CHKB-201ENST00000406938 TRIML1Q8N9V2 468 aa22.74■■□□□ 1.23
CHKB-201ENST00000406938 RNPEPQ9H4A4 650 aa22.74■■□□□ 1.23
CHKB-201ENST00000406938 TUT1Q9H6E5 874 aaKnown RBP22.74■■□□□ 1.23
CHKB-201ENST00000406938 SPC25Q9HBM1 224 aa22.74■■□□□ 1.23
CHKB-201ENST00000406938 HMX1Q9NP08 348 aaPredicted RBP22.74■■□□□ 1.23
CHKB-201ENST00000406938 EXOC1Q9NV70 894 aa22.74■■□□□ 1.23
CHKB-201ENST00000406938 ADAMTS4O75173 837 aa22.73■■□□□ 1.23
CHKB-201ENST00000406938 RHOBTB3O94955 611 aa22.73■■□□□ 1.23
CHKB-201ENST00000406938 F2P00734 622 aa22.73■■□□□ 1.23
CHKB-201ENST00000406938 BMP6P22004 513 aa22.73■■□□□ 1.23
CHKB-201ENST00000406938 CTCFP49711 727 aaPredicted RBP22.73■■□□□ 1.23
CHKB-201ENST00000406938 NKX3-2P78367 333 aa22.73■■□□□ 1.23
CHKB-201ENST00000406938 TARBP2Q15633 366 aaKnown RBP22.73■■□□□ 1.23
CHKB-201ENST00000406938 DPCR1Q3MIW9 517 aa22.73■■□□□ 1.23
CHKB-201ENST00000406938 SLC9C1Q4G0N8 1177 aa22.73■■□□□ 1.23
CHKB-201ENST00000406938 CTU1Q7Z7A3 348 aaKnown RBP22.73■■□□□ 1.23
CHKB-201ENST00000406938 PANK4Q9NVE7 773 aa22.73■■□□□ 1.23
CHKB-201ENST00000406938 FRMD3A2A2Y4 597 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 RSPH10B2B2RC85 870 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 TBCAO75347 108 aaKnown RBP22.72■■□□□ 1.23
CHKB-201ENST00000406938 MYL3P08590 195 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 RSPH10BP0C881 870 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 NLRP12P59046 1061 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 COASYQ13057 564 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 GNASQ5JWF2 1037 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 CCDC65Q8IXS2 484 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 CCDC47Q96A33 483 aaKnown RBP22.72■■□□□ 1.23
CHKB-201ENST00000406938 CEP89Q96ST8 783 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 TSPY26PQ9H489 355 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 ANO10Q9NW15 660 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 ODF2LQ9ULJ1 636 aa22.72■■□□□ 1.23
CHKB-201ENST00000406938 ZBTB42B2RXF5 422 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 HBP1O60381 514 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 MSCO60682 206 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 DGAT1O75907 488 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 KAT2BQ92831 832 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 ZHX3Q9H4I2 956 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 POLD4Q9HCU8 107 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 HIP1RO75146 1068 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 POLGP54098 1239 aaPredicted RBP22.71■■□□□ 1.23
CHKB-201ENST00000406938 PURAQ00577 322 aaKnown RBP22.71■■□□□ 1.23
CHKB-201ENST00000406938 EHHADHQ08426 723 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 MAPK7Q13164 816 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 MAEAQ7L5Y9 396 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 HPS3Q969F9 1004 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 ATP6V0A4Q9HBG4 840 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 PPME1Q9Y570 386 aa22.71■■□□□ 1.23
CHKB-201ENST00000406938 RFC5P40937 340 aa22.7■■□□□ 1.22
CHKB-201ENST00000406938 EMC2Q15006 297 aa22.7■■□□□ 1.22
CHKB-201ENST00000406938 ANO6Q4KMQ2 910 aa22.7■■□□□ 1.22
CHKB-201ENST00000406938 C11orf57Q6ZUT1 292 aaPredicted RBP22.7■■□□□ 1.22
CHKB-201ENST00000406938 SMYD4Q8IYR2 804 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms