RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 ANKRD35Q8N283 1001 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 FAM133AQ8N9E0 248 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 HIPK4Q8NE63 616 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 MTRQ99707 1265 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 PUS3Q9BZE2 481 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 CSRNP2Q9H175 543 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 CARD9Q9H257 536 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 CNNM2Q9H8M5 875 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 VAT1LQ9HCJ6 419 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 TLR7Q9NYK1 1049 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 UBAP1Q9NZ09 502 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 TMOD2Q9NZR1 351 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 SEC63Q9UGP8 760 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 DENND2AQ9ULE3 1009 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 V9GY48 417 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 MYH15Q9Y2K3 1946 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 SIPA1L1O43166 1804 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 PHBP35232 272 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 FXR1P51114 621 aaKnown RBP eCLIP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 STRN3Q13033 797 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 ANKRD20A8PQ5CZ79 823 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 C16orf87Q6PH81 154 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 CCDC80Q76M96 950 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 SMCR8Q8TEV9 937 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 FAM163AQ96GL9 167 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 DMGDHQ9UI17 866 aaKnown RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 SNX12Q9UMY4 172 aa6.33□□□□□ -1.4
HDAC9-203ENST00000406072 USP15Q9Y4E8 981 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-203ENST00000406072 hCG_1642624A0A1W2PR95 340 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 TCP11X1B4DZS4 312 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 DCTN3O75935 186 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 FGRP09769 529 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 PCP11498 1178 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 MRPL12P52815 198 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 POLR2FP61218 127 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 CDR2Q01850 454 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 MDM1Q8TC05 714 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 PRMT1Q99873 361 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 AZI2Q9H6S1 392 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 DNAJC17Q9NVM6 304 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 SMARCAL1Q9NZC9 954 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 HDAC9Q9UKV0 1011 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 SATB2Q9UPW6 733 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 KLHL33A6NCF5 533 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 POC1B-GALNT4F8VUJ3 575 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 ADCY3O60266 1144 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 PDE5AO76074 875 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 GSTA2P09210 222 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 H2AFZP0C0S5 128 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 CHN1P15882 459 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 EEF1GP26641 437 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 EZH2Q15910 746 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 SLC4A8Q2Y0W8 1093 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 H2AFVQ71UI9 128 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 LCA5Q86VQ0 697 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 ZNF483Q8TF39 744 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 U2AF1L4Q8WU68 220 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 ESR2Q92731 530 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 SYMPKQ92797 1274 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 RMDN2Q96LZ7 410 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 AIFM3Q96NN9 605 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 AGXT2Q9BYV1 514 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 MMADHCQ9H3L0 296 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 PNMA2Q9UL42 364 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 ARL2BPQ9Y2Y0 163 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 WDR91A4D1P6 747 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 OPLAHO14841 1288 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 FOXN1O15353 648 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 GTPBP6O43824 516 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 SPAG7O75391 227 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 LGR5O75473 907 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 SYF2O95926 243 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 RPN1P04843 607 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 CASP1P29466 404 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 ADD2P35612 726 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 AARSP49588 968 aaKnown RBP eCLIP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 ANKRD20A2Q5SQ80 823 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 ANKRD20A1Q5TYW2 823 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 OLFML1Q6UWY5 402 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 RBM43Q6ZSC3 357 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 SV2BQ7L1I2 683 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 DYMQ7RTS9 669 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 TEKT1Q969V4 418 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 TMEM87BQ96K49 555 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 DDX47Q9H0S4 455 aaKnown RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 PDP2Q9P2J9 529 aa6.32□□□□□ -1.4
HDAC9-203ENST00000406072 CORO1CQ9ULV4 474 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-203ENST00000406072 G3V3G9 751 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 C21orf2O43822 256 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ACSL3O95573 720 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 CALML3P27482 149 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ADCY8P40145 1251 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 LLGL1Q15334 1064 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 LRRC36Q1X8D7 754 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 KBTBD12Q3ZCT8 623 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ACCSLQ4AC99 568 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 PRR16Q569H4 304 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 DCAF8Q5TAQ9 597 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms