RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 RIC8BQ9NVN3 520 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 MROH6A6NGR9 719 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 TRAF5O00463 557 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 DVL2O14641 736 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 OPA1O60313 960 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 BRINP1O60477 761 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 B4GALT3O60512 393 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 STRN3Q13033 797 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 SMAD2Q15796 467 aaKnown RBP6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 RNF219Q5W0B1 726 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 STPG3Q8N7X2 389 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 WDR66Q8TBY9 1149 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 RELTQ969Z4 430 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 ARHGAP20Q9P2F6 1191 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 TCEAL9Q9UHQ7 104 aa6.63□□□□□ -1.35
HMGB1P13-201ENST00000406019 FOXD2O60548 495 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 KATNA1O75449 491 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 MAP4K4O95819 1239 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 JMJD7P0C870 316 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 BPIP17213 487 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 SDHAP31040 664 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 GLRBP48167 497 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 NEK4P51957 841 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 TBX4P57082 545 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 MTMR1Q13613 665 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 STAT4Q14765 748 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 STILQ15468 1287 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 CATSPEREQ5SY80 951 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 PRAMEF18Q5VWM3 479 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 ASB15Q8WXK1 588 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 RBM15Q96T37 977 aaKnown RBP eCLIP6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 SSBP3Q9BWW4 388 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 AMNQ9BXJ7 453 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 SLC5A4Q9NY91 659 aa6.62□□□□□ -1.35
HMGB1P13-201ENST00000406019 B4E1Z4 1266 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 M0R2C6 588 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 TSPAN6O43657 245 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 KPNA6O60684 536 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 CYP7B1O75881 506 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 MMEP08473 750 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 PTGS1P23219 599 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 CNR2P34972 360 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 FLT3P36888 993 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 KRTAP10-2P60368 255 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 SKOR2Q2VWA4 1001 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 CDCA2Q69YH5 1023 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 TRMT10BQ6PF06 316 aaKnown RBP6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 TSR2Q969E8 191 aaKnown RBP6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 LCORQ96JN0 433 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 TACO1Q9BSH4 297 aaKnown RBP6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 L2HGDHQ9H9P8 463 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 KCNH7Q9NS40 1196 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 USP40Q9NVE5 1235 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 SAMD15Q9P1V8 674 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 ADAM29Q9UKF5 820 aa6.61□□□□□ -1.35
HMGB1P13-201ENST00000406019 ARID4BQ4LE39 1312 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 SLC12A8A0AV02 714 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 CBX4O00257 560 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 SCDO00767 359 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 IL13RA1P78552 427 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 CFAP100Q494V2 611 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 KANK2Q63ZY3 851 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 Q6ZUG5 572 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 KIF18BQ86Y91 864 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 KLHL36Q8N4N3 616 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 CHST14Q8NCH0 376 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 FOXRED1Q96CU9 486 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 AJUBAQ96IF1 538 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 POLR3GLQ9BT43 218 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 KATNBL1Q9H079 304 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 PUS7LQ9H0K6 701 aaKnown RBP6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 TMEM168Q9H0V1 697 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 GABBR1Q9UBS5 961 aa6.6□□□□□ -1.35
HMGB1P13-201ENST00000406019 NCANO14594 1321 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 PRAMEF25A6NGN4 478 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 ZEB2O60315 1214 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 CSF2RBP32927 897 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 NEK2P51955 445 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 IRF9Q00978 393 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 NFATC3Q12968 1075 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 LRSAM1Q6UWE0 723 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 UBE2R2Q712K3 238 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 DDX53Q86TM3 631 aaKnown RBP6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 RTN4RL1Q86UN2 441 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 SPATS2Q86XZ4 545 aaKnown RBP6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 TTC1Q99614 292 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 BOCQ9BWV1 1114 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 TRIM8Q9BZR9 551 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 IFT22Q9H7X7 185 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 INCENPQ9NQS7 918 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 GALNT8Q9NY28 637 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 INVSQ9Y283 1065 aa6.59□□□□□ -1.35
HMGB1P13-201ENST00000406019 NEMP1O14524 444 aa6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 PRC1O43663 620 aa6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 KIAA2012Q0VF49 1180 aa6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 TOP3AQ13472 1001 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 PPP2R5AQ15172 486 aa6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 TBC1D10BQ4KMP7 808 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 CC2D1AQ6P1N0 951 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 C2orf69Q8N8R5 385 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms