RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 KDM3AQ9Y4C1 1321 aa18.67■□□□□ 0.58
CGREF1-206ENST00000405600 NOP56O00567 594 aaKnown RBP18.66■□□□□ 0.58
CGREF1-206ENST00000405600 EDIL3O43854 480 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 ZNF286BP0CG31 522 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 AMPD3Q01432 767 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 SEMA3FQ13275 785 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 MTMR1Q13613 665 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 PTGISQ16647 500 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 METTL7BQ6UX53 244 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 NIPA1Q7RTP0 329 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 RPUSD2Q8IZ73 545 aaKnown RBP18.66■□□□□ 0.58
CGREF1-206ENST00000405600 RETREG2Q8NC44 543 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 RNF214Q8ND24 703 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 LRRC27Q9C0I9 530 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 KCNMB3Q9NPA1 279 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 STK17AQ9UEE5 414 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 DACH1Q9UI36 760 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 STXBP5LQ9Y2K9 1186 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 UBIAD1Q9Y5Z9 338 aa18.66■□□□□ 0.58
CGREF1-206ENST00000405600 PPFIA4O75335 1185 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 ZNF165P49910 485 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 SP2Q02086 613 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 PNOCQ13519 176 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 E2F4Q16254 413 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 HAUS3Q68CZ6 603 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 C7orf31Q8N865 590 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 CCDC47Q96A33 483 aaKnown RBP18.65■□□□□ 0.58
CGREF1-206ENST00000405600 PAGE5Q96GU1 130 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 CDX2Q99626 313 aaPredicted RBP18.65■□□□□ 0.58
CGREF1-206ENST00000405600 GTPBP4Q9BZE4 634 aaKnown RBP18.65■□□□□ 0.58
CGREF1-206ENST00000405600 NT5C3AQ9H0P0 336 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 MTIF3Q9H2K0 278 aaKnown RBP18.65■□□□□ 0.58
CGREF1-206ENST00000405600 TTYH1Q9H313 450 aaPredicted RBP18.65■□□□□ 0.58
CGREF1-206ENST00000405600 JADE2Q9NQC1 790 aa18.65■□□□□ 0.58
CGREF1-206ENST00000405600 LAMA2P24043 3122 aaKnown RBP18.64■□□□□ 0.57
CGREF1-206ENST00000405600 GTPBP6O43824 516 aaPredicted RBP18.64■□□□□ 0.57
CGREF1-206ENST00000405600 HOXD8P13378 290 aaPredicted RBP18.64■□□□□ 0.57
CGREF1-206ENST00000405600 ITGB5P18084 799 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 DNAJB2P25686 324 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 PSEN2P49810 448 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 PTPN11Q06124 597 aaPredicted RBP18.64■□□□□ 0.57
CGREF1-206ENST00000405600 KARSQ15046 597 aaKnown RBP18.64■□□□□ 0.57
CGREF1-206ENST00000405600 CEP55Q53EZ4 464 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 PLA2G4DQ86XP0 818 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 MYLIPQ8WY64 445 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 KAT2BQ92831 832 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 HAS1Q92839 578 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 GSDMAQ96QA5 445 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 MXRA8Q9BRK3 442 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 RMND1Q9NWS8 449 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 CXXC1Q9P0U4 656 aaPredicted RBP18.64■□□□□ 0.57
CGREF1-206ENST00000405600 PCDHA5Q9Y5H7 936 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 LOXHD1Q8IVV2 1947 aa18.64■□□□□ 0.57
CGREF1-206ENST00000405600 A0A087X0B3 334 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 GOLGA6L19H0YKK7 550 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 PBX2P40425 430 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 TPM4P67936 248 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 SP4Q02446 784 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 MFSD10Q14728 455 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 KIAA0753Q2KHM9 967 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 HSDL1Q3SXM5 330 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 NT5DC1Q5TFE4 455 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 GDF6Q6KF10 455 aaPredicted RBP18.63■□□□□ 0.57
CGREF1-206ENST00000405600 KCTD17Q8N5Z5 321 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 ETNPPLQ8TBG4 499 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 SNX29Q8TEQ0 813 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 BPIFA3Q9BQP9 254 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 DNAJC25Q9H1X3 360 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 BCAS3Q9H6U6 928 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 HDAC6Q9UBN7 1215 aa18.63■□□□□ 0.57
CGREF1-206ENST00000405600 SCN10AQ9Y5Y9 1956 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 SMTNL1A8MU46 457 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 BECN2A8MW95 431 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 FAM86B1E9PN63 330 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 F2P00734 622 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 FAM86B2P0C5J1 330 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 AFMP43652 599 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 BFSP2Q13515 415 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 CT47A1Q5JQC4 288 aaPredicted RBP18.62■□□□□ 0.57
CGREF1-206ENST00000405600 PDXDC2PQ6P474 469 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 CYFIP1Q7L576 1253 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 HERVK_113Q902F9 699 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 TIFAQ96CG3 184 aa18.62■□□□□ 0.57
CGREF1-206ENST00000405600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.61■□□□□ 0.57
CGREF1-206ENST00000405600 PP2D1A8MPX8 630 aa18.61■□□□□ 0.57
CGREF1-206ENST00000405600 MEIS1O00470 390 aa18.61■□□□□ 0.57
CGREF1-206ENST00000405600 PLCG1P19174 1290 aa18.61■□□□□ 0.57
CGREF1-206ENST00000405600 CDC25AP30304 524 aa18.61■□□□□ 0.57
CGREF1-206ENST00000405600 MLKLQ8NB16 471 aa18.61■□□□□ 0.57
CGREF1-206ENST00000405600 PBX4Q9BYU1 374 aa18.61■□□□□ 0.57
CGREF1-206ENST00000405600 CBX8Q9HC52 389 aa18.61■□□□□ 0.57
CGREF1-206ENST00000405600 MSRAQ9UJ68 235 aa18.61■□□□□ 0.57
CGREF1-206ENST00000405600 SLC4A7Q9Y6M7 1214 aa18.61■□□□□ 0.57
CGREF1-206ENST00000405600 IGLV3-22A0A075B6J6 115 aa18.6■□□□□ 0.57
CGREF1-206ENST00000405600 BIN1O00499 593 aa18.6■□□□□ 0.57
CGREF1-206ENST00000405600 MSH4O15457 936 aa18.6■□□□□ 0.57
CGREF1-206ENST00000405600 IQCF3P0C7M6 154 aa18.6■□□□□ 0.57
CGREF1-206ENST00000405600 KCNA2P16389 499 aa18.6■□□□□ 0.57
CGREF1-206ENST00000405600 CCT6AP40227 531 aaKnown RBP18.6■□□□□ 0.57
CGREF1-206ENST00000405600 SARSP49591 514 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms