RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 DKC1O60832 514 aaKnown RBP eCLIP4.11□□□□□ -1.75
RTN4-208ENST00000404909 LYPLA2O95372 231 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 GCNT3O95395 438 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 PTMAP06454 111 aaKnown RBP4.11□□□□□ -1.75
RTN4-208ENST00000404909 SOX10P56693 466 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 LACTBP83111 547 aaPredicted RBP4.11□□□□□ -1.75
RTN4-208ENST00000404909 CCDC173Q0VFZ6 552 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 PWP2Q15269 919 aaKnown RBP4.11□□□□□ -1.75
RTN4-208ENST00000404909 SPATA1Q5VX52 437 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 FAM160B1Q5W0V3 765 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 MAMDC4Q6UXC1 1216 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 ZNF467Q7Z7K2 595 aaPredicted RBP4.11□□□□□ -1.75
RTN4-208ENST00000404909 MYOCDQ8IZQ8 938 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 GPR20Q99678 358 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 RWDD2AQ9UIY3 292 aa4.11□□□□□ -1.75
RTN4-208ENST00000404909 DIS3Q9Y2L1 958 aaKnown RBP4.11□□□□□ -1.75
RTN4-208ENST00000404909 PRPF6O94906 941 aaKnown RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 GH1P01241 217 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 OATP04181 439 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 SMPD1P17405 629 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 NMT1P30419 496 aaKnown RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 CASP5P51878 434 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 PSMD2Q13200 908 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 PTPN21Q16825 1174 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 XKR3Q5GH77 459 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 FAM178BQ8IXR5 827 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 CSGALNACT2Q8N6G5 542 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 AFG1LQ8WV93 481 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 SOCS4Q8WXH5 440 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 P2RX5Q93086 422 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 LENG1Q96BZ8 264 aaPredicted RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 DHTKD1Q96HY7 919 aaPredicted RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 PCYT2Q99447 389 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 HSD3B7Q9H2F3 369 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 ANKEF1Q9NU02 776 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 IFNKQ9P0W0 207 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 DBR1Q9UK59 544 aaKnown RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 GJD2Q9UKL4 321 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 MAFBQ9Y5Q3 323 aaPredicted RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 PLXNB2O15031 1838 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 BICDL2A1A5D9 508 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 TULP1O00294 542 aaPredicted RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 PES1O00541 588 aaKnown RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 DYNC1LI2O43237 492 aaPredicted RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 ATG7O95352 703 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 MYBP10242 640 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 ATP4AP20648 1035 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 GUCY2CP25092 1073 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 FLT3LGP49771 235 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 ZNF75DP51815 510 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 POLGP54098 1239 aaPredicted RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 UBASH3AP57075 661 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 FANCCQ00597 558 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 SP3Q02447 781 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 TNFAIP2Q03169 654 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 ARHGAP1Q07960 439 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 EHHADHQ08426 723 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 LAMC2Q13753 1193 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 KIF22Q14807 665 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 ZC2HC1CQ53FD0 456 aaPredicted RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 CT47A1Q5JQC4 288 aaPredicted RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 ANKRD40Q6AI12 368 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 KSR1Q8IVT5 923 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 SCFD1Q8WVM8 642 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 APBA2Q99767 749 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 SRRTQ9BXP5 876 aaKnown RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 GTPBP4Q9BZE4 634 aaKnown RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 XPO4Q9C0E2 1151 aaKnown RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 KATNBL1Q9H079 304 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 CYP26B1Q9NR63 512 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 KCND2Q9NZV8 630 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 GABRQQ9UN88 632 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 TRPC6Q9Y210 931 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 PCDHA2Q9Y5H9 948 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 IGSF9BQ9UPX0 1349 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 FRMD3A2A2Y4 597 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 CCDC169A6NNP5 214 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 ZNF286BP0CG31 522 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 GAP43P17677 238 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 CCNE1P24864 410 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 CNGA1P29973 690 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 PEX3P56589 373 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 PRKCZQ05513 592 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 KCNA1Q09470 495 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 DAW1Q8N136 415 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 GUF1Q8N442 669 aaKnown RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 OR6J1Q8NGC5 347 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 TRIM44Q96DX7 344 aaPredicted RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 SEMA6BQ9H3T3 888 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 SUGCTQ9HAC7 445 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 NRBP2Q9NSY0 501 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 RNF186Q9NXI6 227 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 LARSQ9P2J5 1176 aaKnown RBP4.1□□□□□ -1.75
RTN4-208ENST00000404909 ODF2LQ9ULJ1 636 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 K7ENM7 598 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 ADCY6O43306 1168 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 DGAT1O75907 488 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 STBD1O95210 358 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 KIF20AO95235 890 aa4.1□□□□□ -1.75
RTN4-208ENST00000404909 MYCNP04198 464 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms