RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 NRCAMQ92823 1304 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 MBLAC1A4D2B0 266 aaPredicted RBP7.56□□□□□ -1.2
VIM2P-201ENST00000402383 ATP9BO43861 1147 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 CDC45O75419 566 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 LGR5O75473 907 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 ATG7O95352 703 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 PLEKHA8P1O95397 391 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 LGALS2P05162 132 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 GNAT1P11488 350 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 MYCLP12524 364 aaPredicted RBP7.56□□□□□ -1.2
VIM2P-201ENST00000402383 ITGB5P18084 799 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 HSPA4P34932 840 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 RAB15P59190 212 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 WDR5P61964 334 aaKnown RBP7.56□□□□□ -1.2
VIM2P-201ENST00000402383 HTRA4P83105 476 aaPredicted RBP7.56□□□□□ -1.2
VIM2P-201ENST00000402383 ADGRE1Q14246 886 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 FAM47CQ5HY64 1035 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 USP17L6PQ6QN14 398 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
VIM2P-201ENST00000402383 NLRX1Q86UT6 975 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 HERC6Q8IVU3 1022 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 CUL5Q93034 780 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 FAM161BQ96MY7 647 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 GAS2L1Q99501 681 aaPredicted RBP7.56□□□□□ -1.2
VIM2P-201ENST00000402383 COL25A1Q9BXS0 654 aaPredicted RBP7.56□□□□□ -1.2
VIM2P-201ENST00000402383 BACH2Q9BYV9 841 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 PRKD2Q9BZL6 878 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 MLXIPQ9HAP2 919 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 RIC8AQ9NPQ8 531 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 ANO2Q9NQ90 1003 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 JADE2Q9NQC1 790 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 NOD1Q9Y239 953 aa7.56□□□□□ -1.2
VIM2P-201ENST00000402383 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.55□□□□□ -1.2
VIM2P-201ENST00000402383 IGKV6D-21A0A0A0MT36 114 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 CCDC196A0A1B0GTZ2 297 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 KIF28PB7ZC32 967 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 MEIS1O00470 390 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 GJB5O95377 273 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 CYP3A4P08684 503 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 SREBF1P36956 1147 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 SLC26A2P50443 739 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 TAP1Q03518 808 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 AP3B2Q13367 1082 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 IKBKEQ14164 716 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 ZNF618Q5T7W0 954 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 TAF2Q6P1X5 1199 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 FCHSD1Q86WN1 690 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 SMARCC2Q8TAQ2 1214 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 SEPT1Q8WYJ6 367 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 APBB2Q92870 758 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 WNT8BQ93098 351 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 IL17RAQ96F46 866 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 IPO9Q96P70 1041 aaKnown RBP7.55□□□□□ -1.2
VIM2P-201ENST00000402383 RAD9AQ99638 391 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 RNPEPQ9H4A4 650 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 BCAS3Q9H6U6 928 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 EHMT1Q9H9B1 1298 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 BARHL2Q9NY43 387 aa7.55□□□□□ -1.2
VIM2P-201ENST00000402383 CDV3Q9UKY7 258 aaKnown RBP7.55□□□□□ -1.2
VIM2P-201ENST00000402383 ZNF215Q9UL58 517 aaPredicted RBP7.55□□□□□ -1.2
VIM2P-201ENST00000402383 MAFBQ9Y5Q3 323 aaPredicted RBP7.55□□□□□ -1.2
VIM2P-201ENST00000402383 GSTTP1A0A1W2PQM5 241 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 C17orf102A2RUQ5 167 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 RSPH10B2B2RC85 870 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
VIM2P-201ENST00000402383 ZBTB43O43298 467 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 LPXNO60711 386 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 ATP9AO75110 1047 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 RSPH10BP0C881 870 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 ZNF286BP0CG31 522 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 SMIM10L2AP0DMW4 78 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 SMIM10L2BP0DMW5 78 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 ERVK-21P61565 698 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 FOXC1Q12948 553 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 COL19A1Q14993 1142 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 NTRK3Q16288 839 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 PFKFB3Q16875 520 aaPredicted RBP7.54□□□□□ -1.2
VIM2P-201ENST00000402383 ADCK5Q3MIX3 580 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 CEP55Q53EZ4 464 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 WWC2Q6AWC2 1192 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 SYNE3Q6ZMZ3 975 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 NFXL1Q6ZNB6 911 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 CYFIP1Q7L576 1253 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 PLPPR4Q7Z2D5 763 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 CRIPAKQ8N1N5 446 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 DEPDC4Q8N2C3 294 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 USP38Q8NB14 1042 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 PLPP7Q8NBV4 271 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 TNPO1Q92973 898 aaKnown RBP7.54□□□□□ -1.2
VIM2P-201ENST00000402383 ATP6V0A1Q93050 837 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 MRGPRX2Q96LB1 330 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 KCTD15Q96SI1 283 aaPredicted RBP7.54□□□□□ -1.2
VIM2P-201ENST00000402383 MXRA8Q9BRK3 442 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 MYL10Q9BUA6 226 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 TM6SF1Q9BZW5 370 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 ZMYND12Q9H0C1 365 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 NKX2-4Q9H2Z4 354 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 SMARCAD1Q9H4L7 1026 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 PRDM12Q9H4Q4 367 aa7.54□□□□□ -1.2
VIM2P-201ENST00000402383 KCNH7Q9NS40 1196 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms