RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 DENND2CQ68D51 928 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 SPATS2Q86XZ4 545 aaKnown RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 TRIM59Q8IWR1 403 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 TPH2Q8IWU9 490 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 MYCT1Q8N699 235 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 LINC00116Q8NCU8 138 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 TPCN2Q8NHX9 752 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 LMBR1Q8WVP7 490 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 ELMO3Q96BJ8 720 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 PLCD4Q9BRC7 762 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 YY1AP1Q9H869 796 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 AJAP1Q9UKB5 411 aaPredicted RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 PCDHA1Q9Y5I3 950 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 NUP188Q5SRE5 1749 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 AKAP3O75969 853 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 TNFAIP3P21580 790 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 SCTRP47872 440 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 SNX1Q13596 522 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 CUL1Q13616 776 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 ZC2HC1CQ53FD0 456 aaPredicted RBP9.97□□□□□ -0.81
HPS4-203ENST00000402105 ZNF804AQ7Z570 1209 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 ANKS4BQ8N8V4 417 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 GDAP1Q8TB36 358 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 SLC35G2Q8TBE7 412 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
HPS4-203ENST00000402105 HAS1Q92839 578 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 PLCB1Q9NQ66 1216 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 INTS9Q9NV88 658 aaKnown RBP9.97□□□□□ -0.81
HPS4-203ENST00000402105 RGL1Q9NZL6 768 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 SAMD15Q9P1V8 674 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 TBK1Q9UHD2 729 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 PPP1R9AQ9ULJ8 1098 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 TPX2Q9ULW0 747 aaKnown RBP9.97□□□□□ -0.81
HPS4-203ENST00000402105 DNM3Q9UQ16 869 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 L3MBTL1Q9Y468 752 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 DAAM1Q9Y4D1 1078 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 PCDHGC5Q9Y5F6 944 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 DUOX1Q9NRD9 1551 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 DISP2A7MBM2 1401 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 GOLGA6L10A0A0M3HER8 536 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 PLCG2P16885 1265 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 PON1P27169 355 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 KCNJ1P48048 391 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 PSMD2Q13200 908 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 MESDQ14696 234 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 KIF2BQ8N4N8 673 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 BANK1Q8NDB2 785 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 NEDD1Q8NHV4 660 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 PBKQ96KB5 322 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 ADAM33Q9BZ11 813 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 VEZTQ9HBM0 779 aa9.97□□□□□ -0.81
HPS4-203ENST00000402105 TRAPPC3O43617 180 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 CYP11B2P19099 503 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 SMTNP53814 917 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 CTTNQ14247 550 aaKnown RBP9.96□□□□□ -0.81
HPS4-203ENST00000402105 SLC29A2Q14542 456 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 ZFYVE27Q5T4F4 411 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 PPP4R3AQ6IN85 833 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 CCDC105Q8IYK2 499 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 SYCP3Q8IZU3 236 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 FUKQ8N0W3 1084 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 PROM2Q8N271 834 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 CCDC197Q8NCU1 140 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 SH2D3AQ9BRG2 576 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 JMJD4Q9H9V9 463 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 TRPM3Q9HCF6 1732 aaPredicted RBP9.96□□□□□ -0.81
HPS4-203ENST00000402105 ZBTB39O15060 712 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 ATMINO43313 823 aaPredicted RBP9.96□□□□□ -0.81
HPS4-203ENST00000402105 ACSL3O95573 720 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 GNA14O95837 355 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 NMT1P30419 496 aaKnown RBP9.96□□□□□ -0.81
HPS4-203ENST00000402105 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.81
HPS4-203ENST00000402105 MYO1EQ12965 1108 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 FAM98CQ17RN3 349 aaKnown RBP9.96□□□□□ -0.81
HPS4-203ENST00000402105 ANKRD20A8PQ5CZ79 823 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 SWT1Q5T5J6 900 aaKnown RBP9.96□□□□□ -0.81
HPS4-203ENST00000402105 UBAP2Q5T6F2 1119 aaKnown RBP9.96□□□□□ -0.81
HPS4-203ENST00000402105 IRF2BP2Q7Z5L9 587 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 RPGRQ92834 1020 aaKnown RBP9.96□□□□□ -0.81
HPS4-203ENST00000402105 C18orf8Q96DM3 657 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 CHMP6Q96FZ7 201 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 LBHD1Q9BQE6 289 aaPredicted RBP9.96□□□□□ -0.81
HPS4-203ENST00000402105 REEP2Q9BRK0 252 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 PCIF1Q9H4Z3 704 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 BCL9LQ86UU0 1499 aa9.96□□□□□ -0.81
HPS4-203ENST00000402105 GLI3P10071 1580 aa9.96□□□□□ -0.82
HPS4-203ENST00000402105 DDX39AO00148 427 aaKnown RBP9.96□□□□□ -0.82
HPS4-203ENST00000402105 PEX19P40855 299 aa9.96□□□□□ -0.82
HPS4-203ENST00000402105 MTMR3Q13615 1198 aa9.96□□□□□ -0.82
HPS4-203ENST00000402105 SHROOM1Q2M3G4 852 aaPredicted RBP9.96□□□□□ -0.82
HPS4-203ENST00000402105 LRRC34Q8IZ02 419 aa9.96□□□□□ -0.82
HPS4-203ENST00000402105 CCDC63Q8NA47 563 aa9.96□□□□□ -0.82
HPS4-203ENST00000402105 FBXO25Q8TCJ0 367 aa9.96□□□□□ -0.82
HPS4-203ENST00000402105 EPS8L3Q8TE67 593 aaKnown RBP9.96□□□□□ -0.82
HPS4-203ENST00000402105 NT5C3AQ9H0P0 336 aa9.96□□□□□ -0.82
HPS4-203ENST00000402105 ZBTB21Q9ULJ3 1066 aa9.96□□□□□ -0.82
HPS4-203ENST00000402105 DDX3XO00571 662 aaKnown RBP eCLIP9.95□□□□□ -0.82
HPS4-203ENST00000402105 EVI5O60447 810 aa9.95□□□□□ -0.82
HPS4-203ENST00000402105 NR3C1P04150 777 aa9.95□□□□□ -0.82
HPS4-203ENST00000402105 ELF1P32519 619 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms