RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 SKIV2LQ15477 1246 aaKnown RBP16.43■□□□□ 0.22
SMARCE1-204ENST00000400122 LEXMQ3ZCV2 418 aa16.43■□□□□ 0.22
SMARCE1-204ENST00000400122 KRT40Q6A162 431 aa16.43■□□□□ 0.22
SMARCE1-204ENST00000400122 FAM117BQ6P1L5 589 aa16.43■□□□□ 0.22
SMARCE1-204ENST00000400122 KIAA0319LQ8IZA0 1049 aa16.43■□□□□ 0.22
SMARCE1-204ENST00000400122 PHKBQ93100 1093 aa16.43■□□□□ 0.22
SMARCE1-204ENST00000400122 PADI3Q9ULW8 664 aa16.43■□□□□ 0.22
SMARCE1-204ENST00000400122 M0R2N6 131 aa16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 ATP4AP20648 1035 aa16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 IGBP1P78318 339 aa16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 TFF2Q03403 129 aa16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 Q4G0T1 1027 aa16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 MBOAT7Q96N66 472 aa16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 SLC26A6Q9BXS9 759 aa16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 UBE2ZQ9H832 354 aaPredicted RBP16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 C1orf112Q9NSG2 853 aa16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 PCDHA4Q9UN74 947 aa16.42■□□□□ 0.22
SMARCE1-204ENST00000400122 UPP2O95045 317 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 CD52P31358 61 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 JAK3P52333 1124 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 CRYBB1P53674 252 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 CDC42EP1Q00587 391 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 SSRP1Q08945 709 aaKnown RBP16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 PAK2Q13177 524 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 GPM6BQ13491 265 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 PRR16Q569H4 304 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 SWSAP1Q6NVH7 229 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 RTN4RL1Q86UN2 441 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 RSPH1Q8WYR4 309 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 SLC5A5Q92911 643 aa16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 FAM49AQ9H0Q0 323 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-204ENST00000400122 FNDC1Q4ZHG4 1894 aaPredicted RBP16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 CPLX1O14810 134 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 GPR182O15218 404 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 EDIL3O43854 480 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 CDKL5O76039 1030 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 C22orf31O95567 290 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 NEFLP07196 543 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 NLRP5P59047 1200 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 B3GNT9Q6UX72 402 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 LINC01465Q8N7H1 131 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 BANK1Q8NDB2 785 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 NEK9Q8TD19 979 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 LINC01599Q8WXQ3 324 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 PABPC5Q96DU9 382 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 NSUN3Q9H649 340 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 ELAC1Q9H777 363 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 ERVK-5Q9HDB9 667 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 VPS54Q9P1Q0 977 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 STK36Q9NRP7 1315 aa16.4■□□□□ 0.22
SMARCE1-204ENST00000400122 ATG2AQ2TAZ0 1938 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 MSH4O15457 936 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 TMOD1P28289 359 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 SARSP49591 514 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 KCNQ1P51787 676 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 BTG3Q14201 252 aaPredicted RBP16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 SLC24A5Q71RS6 500 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 TRAPPC12Q8WVT3 735 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 C1QTNF1Q9BXJ1 281 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 NCOA5Q9HCD5 579 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 DISC1Q9NRI5 854 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 RGS18Q9NS28 235 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 NRBP2Q9NSY0 501 aa16.39■□□□□ 0.21
SMARCE1-204ENST00000400122 ADAMTS3O15072 1205 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 RPS6KA5O75582 802 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 PSMD10O75832 226 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 MMP1P03956 469 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 CCT2P78371 535 aaKnown RBP16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 FAM189BP81408 668 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 ANKRD1Q15327 319 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 NPY5RQ15761 445 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 CTC1Q2NKJ3 1217 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 BLIDQ8IZY5 108 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 TMX1Q9H3N1 280 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 FAM50BQ9Y247 325 aa16.38■□□□□ 0.21
SMARCE1-204ENST00000400122 FSD2A1L4K1 749 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 C9IYK1 514 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 DDX39AO00148 427 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 GAS7O60861 476 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 GPR32O75388 356 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 GCFC2P16383 781 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 XBP1P17861 261 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 CTNNB1P35222 781 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 UBE3AQ05086 875 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 TARBP2Q15633 366 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 CSPP1Q1MSJ5 1256 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 CKAP2LQ8IYA6 745 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 TBCKQ8TEA7 893 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 NAP1L4Q99733 375 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 TEKT3Q9BXF9 490 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 NIFKQ9BYG3 293 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 PDRG1Q9NUG6 133 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 GABBR1Q9UBS5 961 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 PPME1Q9Y570 386 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 KIAA1671Q9BY89 1806 aa16.37■□□□□ 0.21
SMARCE1-204ENST00000400122 ZNF862O60290 1169 aa16.36■□□□□ 0.21
SMARCE1-204ENST00000400122 OATP04181 439 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms