RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 MED4Q9NPJ6 270 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 INTS9Q9NV88 658 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 HAUS2Q9NVX0 235 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 UTYO14607 1347 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PHLPP1O60346 1717 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PALMO75781 387 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 GYS2P54840 703 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 GABPB1Q06547 395 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 KCNH2Q12809 1159 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 SEPT2Q15019 361 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 TRIP13Q15645 432 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 FAM160B1Q5W0V3 765 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 EP400NLQ6ZTU2 488 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 TMEM179Q6ZVK1 233 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 TMTC3Q6ZXV5 915 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 MB21D1Q8N884 522 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 GDAP1Q8TB36 358 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 FAM71BQ8TC56 605 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 FAM193BQ96PV7 902 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 ACCSQ96QU6 501 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 CHP1Q99653 195 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 HOMER3Q9NSC5 361 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 BARHL2Q9NY43 387 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PACSIN2Q9UNF0 486 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 FAN1Q9Y2M0 1017 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 TACC3Q9Y6A5 838 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ZHX2Q9Y6X8 837 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 CRB1P82279 1406 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PASKQ96RG2 1323 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 F5H6K3 240 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ATXN8OSP0DMR3 200 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 GAP43P17677 238 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ARHGAP25P42331 645 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 MFAP3P55082 362 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 RNASELQ05823 741 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 KLRC3Q07444 240 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 C10orf76Q5T2E6 689 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 STOX1Q6ZVD7 989 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 VSTM4Q8IW00 320 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 CCNYQ8ND76 341 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 GRK7Q8WTQ7 553 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 MXD3Q9BW11 206 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 NARFQ9UHQ1 456 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ANAPC7Q9UJX3 599 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 XRN1Q8IZH2 1706 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 WNK2Q9Y3S1 2297 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ABCB11O95342 1321 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 A0A1B0GUL6 1792 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 REREQ9P2R6 1566 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PALM3A6NDB9 673 aaPredicted RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 IPO5O00410 1097 aaKnown RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 ZBTB5O15062 677 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 MCF2LO15068 1137 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 RNF40O75150 1001 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 PTPREP23469 700 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 PPP2R5AQ15172 486 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 ABI1Q8IZP0 508 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 DNAAF3Q8N9W5 541 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 IGDCC4Q8TDY8 1250 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 MASTLQ96GX5 879 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 WRNIP1Q96S55 665 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 RPF1Q9H9Y2 349 aaKnown RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 SLC38A10Q9HBR0 1119 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 FNDC3AQ9Y2H6 1198 aaKnown RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 KNDC1Q76NI1 1749 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 ARHGAP42A6NI28 874 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 USP17L10C9JJH3 530 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 FOXN1O15353 648 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 CLDN3O15551 220 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 ECE2O60344 883 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 MYL1P05976 194 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 MKRN4PQ13434 485 aaPredicted RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 ZNF772Q68DY9 489 aaPredicted RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 SHC4Q6S5L8 630 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 RSRC2Q7L4I2 434 aaKnown RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 AFAP1L2Q8N4X5 818 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 FAM84BQ96KN1 310 aaPredicted RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 RAVER2Q9HCJ3 691 aaKnown RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 NFU1Q9UMS0 254 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 RPAP1Q9BWH6 1393 aaPredicted RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 NPHP3-ACAD11A0A0J9YXS1 232 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 ZNF233A6NK53 670 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 GOLGA8KD6RF30 607 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 GOLGA8MH3BSY2 632 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 HEXIM1O94992 359 aaKnown RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 OATP04181 439 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 TROVE2P10155 538 aaKnown RBP eCLIP3.51□□□□□ -1.85
KNL1-202ENST00000399668 CHRNA5P30532 468 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 MXI1P50539 228 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 SATB1Q01826 763 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 PSMD2Q13200 908 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 FBXO38Q6PIJ6 1188 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 ATG9AQ7Z3C6 839 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 CLEC10AQ8IUN9 316 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 LRRC8CQ8TDW0 803 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 P3H4Q92791 437 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 CDHR1Q96JP9 859 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 RAB3IPQ96QF0 476 aaPredicted RBP3.51□□□□□ -1.85
KNL1-202ENST00000399668 NUF2Q9BZD4 464 aa3.51□□□□□ -1.85
KNL1-202ENST00000399668 SNX25Q9H3E2 840 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms