RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 HNRNPH3P31942 346 aaKnown RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 RPS6P62753 249 aaKnown RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 MRPS9P82933 396 aaKnown RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 CDK17Q00537 523 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 GFPT1Q06210 699 aaPredicted RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 PLS1Q14651 629 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 COG2Q14746 738 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 ICE2Q659A1 982 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 PDXDC1Q6P996 788 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 NSMFQ6X4W1 530 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 PPP4R3CPQ6ZMV5 832 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 SYTL5Q8TDW5 730 aaPredicted RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 GOLGA1Q92805 767 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 TRAF3IP3Q9Y228 551 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 PDXKO00764 312 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 CYP2C19P33261 490 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
COL25A1-202ENST00000399127 KIF5AQ12840 1032 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 ITGB3BPQ13352 177 aaPredicted RBP12.92□□□□□ -0.34
COL25A1-202ENST00000399127 ANKRD13CQ8N6S4 541 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 ATG4CQ96DT6 458 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 IQCDQ96DY2 449 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 NACC1Q96RE7 527 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 PARVGQ9HBI0 331 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 ADARB2Q9NS39 739 aaKnown RBP12.92□□□□□ -0.34
COL25A1-202ENST00000399127 PPP1R9AQ9ULJ8 1098 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 MYO6Q9UM54 1294 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 TMEM150BA6NC51 233 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 CALUO43852 315 aaPredicted RBP12.92□□□□□ -0.34
COL25A1-202ENST00000399127 TLR2O60603 784 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 SLC9A1P19634 815 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 VAV2P52735 878 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 RAPGEF1Q13905 1077 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 EPHA7Q15375 998 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 TKFCQ3LXA3 575 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 MIER3Q7Z3K6 550 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 ZC3H3Q8IXZ2 948 aaKnown RBP12.92□□□□□ -0.34
COL25A1-202ENST00000399127 DRC1Q96MC2 740 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 MLXIPQ9HAP2 919 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 PICK1Q9NRD5 415 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 TYW1Q9NV66 732 aaKnown RBP12.92□□□□□ -0.34
COL25A1-202ENST00000399127 CEP72Q9P209 647 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 PCDHA13Q9Y5I0 950 aa12.92□□□□□ -0.34
COL25A1-202ENST00000399127 SBF1O95248 1867 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 ZMYM2Q9UBW7 1377 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 TGFB1I1O43294 461 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 AMPD2Q01433 879 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 ODR4Q5SWX8 454 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 HGSNATQ68CP4 663 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 B3GNT9Q6UX72 402 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 MCF2L2Q86YR7 1114 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 DCPSQ96C86 337 aaKnown RBP12.91□□□□□ -0.34
COL25A1-202ENST00000399127 CAPZA3Q96KX2 299 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 PARD6BQ9BYG5 372 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 OLFML3Q9NRN5 406 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 ARHGEF35A5YM69 484 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 DHX15O43143 795 aaKnown RBP12.91□□□□□ -0.34
COL25A1-202ENST00000399127 XRCC5P13010 732 aaKnown RBP12.91□□□□□ -0.34
COL25A1-202ENST00000399127 GAP43P17677 238 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 HMGCS2P54868 508 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 MTMR1Q13613 665 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 SFMBT2Q5VUG0 894 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 FAM178BQ8IXR5 827 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 GPR161Q8N6U8 529 aaKnown RBP12.91□□□□□ -0.34
COL25A1-202ENST00000399127 CEP112Q8N8E3 955 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 FAM133AQ8N9E0 248 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 RIT2Q99578 217 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 ST7Q9NRC1 585 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 ZHX2Q9Y6X8 837 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 FRMPD4Q14CM0 1322 aa12.91□□□□□ -0.34
COL25A1-202ENST00000399127 ADM5C9JUS6 153 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 VWA5AO00534 786 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 RHOXF2BP0C7M4 288 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 BMT2Q1RMZ1 405 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 SCYL3Q8IZE3 742 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 RABGGTAQ92696 567 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 RMDN3Q96TC7 470 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 RHOXF2Q9BQY4 288 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 AGO4Q9HCK5 861 aaKnown RBP12.9□□□□□ -0.34
COL25A1-202ENST00000399127 ARGLU1Q9NWB6 273 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-202ENST00000399127 CEP83Q9Y592 693 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 CAPN6Q9Y6Q1 641 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.34
COL25A1-202ENST00000399127 TESPA1A2RU30 521 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-202ENST00000399127 ATP9AO75110 1047 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 ZBED4O75132 1171 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 HIP1RO75146 1068 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 MOCS3O95396 460 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 AFPP02771 609 aaKnown RBP12.9□□□□□ -0.34
COL25A1-202ENST00000399127 BACE1P56817 501 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 PGM5Q15124 567 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 SUPT20HL1Q3ZLR7 823 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 TMCO3Q6UWJ1 677 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 RNF207Q6ZRF8 634 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms