RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 RGL1Q9NZL6 768 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 WRAP73Q9P2S5 460 aaPredicted RBP15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 PCDHA12Q9UN75 941 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 WDR81Q562E7 1941 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 BAIAP3O94812 1187 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MYOGP15173 224 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 DEFB103AP81534 67 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 IKBKEQ14164 716 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MCTP1Q6DN14 999 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 PPP1R16BQ96T49 567 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 IFIH1Q9BYX4 1025 aaKnown RBP15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SEPT9Q9UHD8 586 aaPredicted RBP15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 YBX2Q9Y2T7 364 aaKnown RBP15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 CHD7Q9P2D1 2997 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 KCNJ6P48051 423 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TOB1P50616 345 aaPredicted RBP15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CLCN3P51790 818 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 PSMC5P62195 406 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CYP4A11Q02928 519 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CUL4AQ13619 759 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 LPIN1Q14693 890 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 EPHA7Q15375 998 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 XKR3Q5GH77 459 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 FBXO47Q5MNV8 452 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TTC38Q5R3I4 469 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ZNF697Q5TEC3 545 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 IER5Q5VY09 327 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ANO5Q75V66 913 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 LRRC71Q8N4P6 559 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TIFAQ96CG3 184 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CDHR5Q9HBB8 845 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 MTMR10Q9NXD2 777 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CEP131Q9UPN4 1083 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 GINS2Q9Y248 185 aa15.83■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ABHD14A-ACY1A0A1B0GW23 586 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 DDX11L8A8MPP1 907 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 H3BQV1 296 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 VTNP04004 478 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 P4HBP07237 508 aaKnown RBP15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 QARSP47897 775 aaKnown RBP15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CTTNQ14247 550 aaKnown RBP15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TARBP2Q15633 366 aaKnown RBP15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 MTERF2Q49AM1 385 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 LARP1BQ659C4 914 aaKnown RBP15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 EFCAB12Q6NXP0 572 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 SEPT8Q92599 483 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 DYDC2Q96IM9 177 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 SLC9A7Q96T83 725 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 LXNQ9BS40 222 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CELF4Q9BZC1 486 aaKnown RBP15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 SEMA6BQ9H3T3 888 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 AGO3Q9H9G7 860 aaKnown RBP15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 SIP14410 1827 aa15.82■□□□□ 0.12
HLA-DQB1-202ENST00000399079 POTEMA6NI47 508 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 M0QZ92 97 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ZBTB39O15060 712 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 RPLP2P05387 115 aaKnown RBP15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TBC1D8BQ0IIM8 1120 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 PLA2G4FQ68DD2 849 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 HERC6Q8IVU3 1022 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 NME8Q8N427 588 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 PHOSPHO2Q8TCD6 241 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CEP89Q96ST8 783 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 NIFKQ9BYG3 293 aaKnown RBP15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 NKX2-4Q9H2Z4 354 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 SUGCTQ9HAC7 445 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 MSRAQ9UJ68 235 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 PCDHB6Q9Y5E3 794 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TRPV2Q9Y5S1 764 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 EVPLQ92817 2033 aa15.81■□□□□ 0.12
HLA-DQB1-202ENST00000399079 MAGEB2O15479 319 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 SLITRK3O94933 977 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CD52P31358 61 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TRAPPC10P48553 1259 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 NPEPPSP55786 919 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 DRP2Q13474 957 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 RAB30Q15771 203 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 KIZQ2M2Z5 673 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 FAM117BQ6P1L5 589 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TPH2Q8IWU9 490 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 LINC01465Q8N7H1 131 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TMEM40Q8WWA1 233 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ZNF668Q96K58 619 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 GUCD1Q96NT3 240 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 EIF2AK1Q9BQI3 630 aaKnown RBP15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ZNF576Q9H609 170 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 NOL7Q9UMY1 257 aaKnown RBP15.8■□□□□ 0.12
HLA-DQB1-202ENST00000399079 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 K7ELQ4 463 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 EFCAB14O75071 495 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 OR52Z1P0C646 297 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TECP42680 631 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TMEM266Q2M3C6 531 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TSHZ1Q6ZSZ6 1077 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 MYOCDQ8IZQ8 938 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms