RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 ESRRBO95718 433 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 SOX11P35716 441 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 ETF1P62495 437 aaKnown RBP10.04□□□□□ -0.8
ATL3-201ENST00000398868 BRINP3Q76B58 766 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 RTKN2Q8IZC4 609 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 OR8K1Q8NGG5 319 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 USP6NLQ92738 828 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 NT5C1BQ96P26 610 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 HEMGNQ9BXL5 484 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 SLC12A6Q9UHW9 1150 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 TNPO2O14787 897 aaKnown RBP10.04□□□□□ -0.8
ATL3-201ENST00000398868 TFRCP02786 760 aaKnown RBP10.04□□□□□ -0.8
ATL3-201ENST00000398868 LCP1P13796 627 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 IL9RQ01113 521 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 RBL2Q08999 1139 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 EPC1Q9H2F5 836 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 AXIN2Q9Y2T1 843 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 PCDHB6Q9Y5E3 794 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 PSAPP07602 524 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 CROCCP2Q86T23 111 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 KIAA1468Q9P260 1216 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 CCDC159P0C7I6 412 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 CASP14P31944 242 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 HADHAP40939 763 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 UBE3AQ05086 875 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 PPP1R13LQ8WUF5 828 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 EPS15L1Q9UBC2 864 aa10.04□□□□□ -0.8
ATL3-201ENST00000398868 BBOX1O75936 387 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 DDHD2O94830 711 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 ASPHQ12797 758 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 RGS9BPQ6ZS82 235 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 NACC1Q96RE7 527 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 CAPN10Q9HC96 672 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 GGT7Q9UJ14 662 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 PARD3Q8TEW0 1356 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 NPHP3-ACAD11A0A0J9YXS1 232 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 SEMA3EO15041 775 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 GSTA4O15217 222 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 CELF2O95319 508 aaKnown RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 PLCG1P19174 1290 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 PDCLQ13371 301 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 THOC5Q13769 683 aaKnown RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 TCEA2Q15560 299 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 IL31Q6EBC2 164 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 ST13P4Q8IZP2 240 aaPredicted RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 FLCNQ8NFG4 579 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 BHMT2Q9H2M3 363 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 RPAP3Q9H6T3 665 aaPredicted RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 ABCB6Q9NP58 842 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 EIF2AK4Q9P2K8 1649 aaKnown RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 INHBAP08476 426 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 SP100P23497 879 aaPredicted RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 ADD2P35612 726 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 NLRP11P59045 1033 aaKnown RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 EZH2Q15910 746 aaKnown RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 MAST1Q9Y2H9 1570 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 MAN1A2O60476 641 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 YWHAHQ04917 246 aaPredicted RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 MYO1EQ12965 1108 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 NAA30Q147X3 362 aaPredicted RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 ZNF568Q3ZCX4 644 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 AGR3Q8TD06 166 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 PSPC1Q8WXF1 523 aaKnown RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 MAGOHBQ96A72 148 aaKnown RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 HAUS8Q9BT25 410 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 ORC6Q9Y5N6 252 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 E2F8A0AVK6 867 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 C6orf222P0C671 652 aaPredicted RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 MCAMP43121 646 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 RAP1GDS1P52306 607 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 BLVRAP53004 296 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 MFAP3P55082 362 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 ART3Q13508 389 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 SLC9A5Q14940 896 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 CCDC92Q53HC0 331 aaPredicted RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 ZNF280CQ8ND82 737 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 ACCSQ96QU6 501 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 PCSK1NQ9UHG2 260 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 FBXO2Q9UK22 296 aaPredicted RBP10.03□□□□□ -0.8
ATL3-201ENST00000398868 FZD1Q9UP38 647 aa10.03□□□□□ -0.8
ATL3-201ENST00000398868 FAM47DPA6NHR8 397 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 MYO1FO00160 1098 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 ARHGEF18Q6ZSZ5 1173 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 POLR3CQ9BUI4 534 aaPredicted RBP10.02□□□□□ -0.8
ATL3-201ENST00000398868 PBRM1Q86U86 1689 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 NPHP4O75161 1426 aaPredicted RBP10.02□□□□□ -0.8
ATL3-201ENST00000398868 H3BRJ5 948 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 KDM1AO60341 852 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 PLA2G4BP0C869 781 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 MCF2P10911 925 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 SKIP12755 728 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 MXD4Q14582 209 aaPredicted RBP10.02□□□□□ -0.8
ATL3-201ENST00000398868 BEND6Q5SZJ8 279 aaPredicted RBP10.02□□□□□ -0.8
ATL3-201ENST00000398868 TRIM59Q8IWR1 403 aa10.02□□□□□ -0.8
ATL3-201ENST00000398868 YAF2Q8IY57 180 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms