RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 TRPV6Q9H1D0 765 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 DNAJC12Q9UKB3 198 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 APOBEC2Q9Y235 224 aaKnown RBP12.64□□□□□ -0.39
TMF1-201ENST00000398559 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 H3BRJ5 948 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 GOLGA8MH3BSY2 632 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 CTIFO43310 598 aaKnown RBP12.64□□□□□ -0.39
TMF1-201ENST00000398559 C1orf146Q5VVC0 180 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 GRAMD4Q6IC98 578 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 TRIM59Q8IWR1 403 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 ECT2Q9H8V3 914 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 ANAPC7Q9UJX3 599 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 CRKLP46109 303 aaKnown RBP12.64□□□□□ -0.39
TMF1-201ENST00000398559 ARL4CP56559 192 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 PPP2R2AP63151 447 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 ACTN3Q08043 901 aaPredicted RBP12.64□□□□□ -0.39
TMF1-201ENST00000398559 MYO1EQ12965 1108 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 SIRT2Q8IXJ6 389 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 SIX6OS1Q8N1H7 587 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 HEMGNQ9BXL5 484 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 LRRC53A6NM62 1247 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 KRT37O76014 449 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 APBA3O96018 575 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 PMLP29590 882 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 ARHGDIAP52565 204 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 SNAP25P60880 206 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 C16orf87Q6PH81 154 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 GJB4Q9NTQ9 266 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 CCDC195A0A1B0GUA6 201 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 LGALS16A8MUM7 142 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 PI4K2BG5E9Z4 385 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
TMF1-201ENST00000398559 RNF217Q8TC41 542 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 SAAL1Q96ER3 474 aa12.64□□□□□ -0.39
TMF1-201ENST00000398559 USP27XA6NNY8 438 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 NCK2O43639 380 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 TAF1BQ53T94 588 aaPredicted RBP12.63□□□□□ -0.39
TMF1-201ENST00000398559 KLC2Q9H0B6 622 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 TRPC5Q9UL62 973 aaPredicted RBP12.63□□□□□ -0.39
TMF1-201ENST00000398559 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
TMF1-201ENST00000398559 TAC1P20366 129 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 NFRKBQ6P4R8 1299 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 NLRP14Q86W24 1093 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 SPDYE1Q8NFV5 336 aaPredicted RBP12.63□□□□□ -0.39
TMF1-201ENST00000398559 KANSL2Q9H9L4 492 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 HOXA13P31271 388 aaPredicted RBP12.63□□□□□ -0.39
TMF1-201ENST00000398559 NBPF9Q3BBW0 867 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 Q3C1V9 767 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 EIF4E1BA6NMX2 242 aaKnown RBP12.63□□□□□ -0.39
TMF1-201ENST00000398559 WDR64B1ANS9 1081 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 ATICP31939 592 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 LIFRP42702 1097 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 TOB2Q14106 344 aaPredicted RBP12.63□□□□□ -0.39
TMF1-201ENST00000398559 KCTD2Q14681 263 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 SLFNL1Q499Z3 407 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 FSCBQ5H9T9 825 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 OSBPL9Q96SU4 736 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 FAM167BQ9BTA0 163 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 MSTO1Q9BUK6 570 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 PIH1D3Q9NQM4 214 aaKnown RBP12.63□□□□□ -0.39
TMF1-201ENST00000398559 FAM8A1Q9UBU6 413 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
TMF1-201ENST00000398559 NOC2LQ9Y3T9 749 aaKnown RBP12.63□□□□□ -0.39
TMF1-201ENST00000398559 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 ERFEQ4G0M1 354 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 NCLNQ969V3 563 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 RPF1Q9H9Y2 349 aaKnown RBP12.62□□□□□ -0.39
TMF1-201ENST00000398559 PPP1R12AO14974 1030 aaPredicted RBP12.62□□□□□ -0.39
TMF1-201ENST00000398559 PSAPP07602 524 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 ATXN8OSP0DMR3 200 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 PYGBP11216 843 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 DHX38Q92620 1227 aaKnown RBP12.62□□□□□ -0.39
TMF1-201ENST00000398559 CNOT8Q9UFF9 292 aaKnown RBP12.62□□□□□ -0.39
TMF1-201ENST00000398559 BICRAQ9NZM4 1560 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 NOP14P78316 857 aaKnown RBP12.62□□□□□ -0.39
TMF1-201ENST00000398559 PTPN12Q05209 780 aaKnown RBP12.62□□□□□ -0.39
TMF1-201ENST00000398559 ALCAMQ13740 583 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 CCDC144BQ3MJ40 725 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 ANGPTL8Q6UXH0 198 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 ALKBH8Q96BT7 664 aaKnown RBP12.62□□□□□ -0.39
TMF1-201ENST00000398559 RMDN2Q96LZ7 410 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 BHMT2Q9H2M3 363 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 HDAC6Q9UBN7 1215 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 SERPINB13Q9UIV8 391 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 PRCPP42785 496 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 PEX3P56589 373 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 EXOC8Q8IYI6 725 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 TGS1Q96RS0 853 aaKnown RBP12.62□□□□□ -0.39
TMF1-201ENST00000398559 DCTN4Q9UJW0 460 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 USP21Q9UK80 565 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 CREB3O43889 395 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 CHGBP05060 677 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 SRGAP2CP0DJJ0 459 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 DPP9Q86TI2 863 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms