RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 GPC5P78333 572 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 TBX2Q13207 712 aaPredicted RBP11.91□□□□□ -0.5
HPS4-202ENST00000398145 HSP90AA5PQ58FG0 334 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 SFR1Q86XK3 245 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 MAP2K7O14733 419 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 RNF8O76064 485 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 TOB1P50616 345 aaPredicted RBP11.91□□□□□ -0.5
HPS4-202ENST00000398145 SNX16P57768 344 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 DMP1Q13316 513 aaPredicted RBP11.91□□□□□ -0.5
HPS4-202ENST00000398145 LRRC14Q15048 493 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 DDX23Q9BUQ8 820 aaKnown RBP11.91□□□□□ -0.5
HPS4-202ENST00000398145 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 SUFUQ9UMX1 484 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 CHD1O14646 1710 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 RAD51CO43502 376 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 TMOD1P28289 359 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 AGBL2Q5U5Z8 902 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 GLYCTKQ8IVS8 523 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 FBXL16Q8N461 479 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 OR2W6PQ8NHA6 318 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 FAM167BQ9BTA0 163 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 ANO3Q9BYT9 981 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 ECT2Q9H8V3 914 aa11.91□□□□□ -0.5
HPS4-202ENST00000398145 EPB41L4AQ9HCS5 686 aaPredicted RBP11.91□□□□□ -0.5
HPS4-202ENST00000398145 WDR91A4D1P6 747 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 HNRNPDLO14979 420 aaKnown RBP11.9□□□□□ -0.5
HPS4-202ENST00000398145 TTI1O43156 1089 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 STAM2O75886 525 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 PRLRP16471 622 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 COG7P83436 770 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 NR1H3Q13133 447 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 KDM7AQ6ZMT4 941 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
HPS4-202ENST00000398145 DEPTORQ8TB45 409 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 ARL8AQ96BM9 186 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 XPO6Q96QU8 1125 aaKnown RBP11.9□□□□□ -0.5
HPS4-202ENST00000398145 SLC40A1Q9NP59 571 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 DUSP10Q9Y6W6 482 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 H0YCG3 227 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 SCNN1DP51172 638 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 YWHAEP62258 255 aaKnown RBP11.9□□□□□ -0.5
HPS4-202ENST00000398145 MYCBPAPQ8TBZ2 947 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 ANKS1AQ92625 1134 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 FAM81BQ96LP2 452 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 PCDHA6Q9UN73 950 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 PCDHA8Q9Y5H6 950 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 POTECB2RU33 542 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 UBE2Q2LH0YL09 131 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 AGTP01019 485 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 KRT19P08727 400 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 HSPA2P54652 639 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 CAV1Q03135 178 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 DRAP1Q14919 205 aaPredicted RBP11.9□□□□□ -0.5
HPS4-202ENST00000398145 BSPRYQ5W0U4 402 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 TTBK2Q6IQ55 1244 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
HPS4-202ENST00000398145 EPM2AIP1Q7L775 607 aaPredicted RBP11.9□□□□□ -0.5
HPS4-202ENST00000398145 CALR3Q96L12 384 aaKnown RBP11.9□□□□□ -0.5
HPS4-202ENST00000398145 TGS1Q96RS0 853 aaKnown RBP11.9□□□□□ -0.5
HPS4-202ENST00000398145 SFI1A8K8P3 1242 aa11.9□□□□□ -0.51
HPS4-202ENST00000398145 KLK7P49862 253 aa11.9□□□□□ -0.51
HPS4-202ENST00000398145 CCDC137Q6PK04 289 aaKnown RBP11.9□□□□□ -0.51
HPS4-202ENST00000398145 CENPUQ71F23 418 aa11.9□□□□□ -0.51
HPS4-202ENST00000398145 CDAN1Q8IWY9 1227 aa11.9□□□□□ -0.51
HPS4-202ENST00000398145 SLC44A5Q8NCS7 719 aa11.9□□□□□ -0.51
HPS4-202ENST00000398145 KCNV2Q8TDN2 545 aa11.9□□□□□ -0.51
HPS4-202ENST00000398145 ZNF577Q9BSK1 485 aa11.9□□□□□ -0.51
HPS4-202ENST00000398145 ISCUQ9H1K1 167 aa11.9□□□□□ -0.51
HPS4-202ENST00000398145 GEMIN8Q9NWZ8 242 aaKnown RBP11.9□□□□□ -0.51
HPS4-202ENST00000398145 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.9□□□□□ -0.51
HPS4-202ENST00000398145 USH1CQ9Y6N9 552 aa11.9□□□□□ -0.51
HPS4-202ENST00000398145 FRMPD1Q5SYB0 1578 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 GYG2O15488 501 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 KLRC1P26715 233 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 PDIA5Q14554 519 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 GEN1Q17RS7 908 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 TBC1D9BQ66K14 1250 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 AFAP1L2Q8N4X5 818 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 USP38Q8NB14 1042 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 SLC17A8Q8NDX2 589 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 GRAMD1AQ96CP6 724 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 YY1AP1Q9H869 796 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 ANGPTL2Q9UKU9 493 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 TDP2O95551 362 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 CSF1RP07333 972 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 ARHGAP4P98171 946 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 NAB2Q15742 525 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 CEP120Q8N960 986 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 SYT2Q8N9I0 419 aaPredicted RBP11.89□□□□□ -0.51
HPS4-202ENST00000398145 HAUS1Q96CS2 278 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 TRIM55Q9BYV6 548 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 TMEM260Q9NX78 707 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 MAD1L1Q9Y6D9 718 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 CAPN6Q9Y6Q1 641 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 PFDN1O60925 122 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 SETSIPP0DME0 302 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 CHN1P15882 459 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms