RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 GDAQ9Y2T3 454 aa23.55■■□□□ 1.36
CPNE1-204ENST00000397443 SFI1A8K8P3 1242 aa23.55■■□□□ 1.36
CPNE1-204ENST00000397443 GNRH1P01148 92 aa23.55■■□□□ 1.36
CPNE1-204ENST00000397443 AKR1A1P14550 325 aa23.55■■□□□ 1.36
CPNE1-204ENST00000397443 UNC13DQ70J99 1090 aa23.55■■□□□ 1.36
CPNE1-204ENST00000397443 TRMT44Q8IYL2 757 aaKnown RBP23.55■■□□□ 1.36
CPNE1-204ENST00000397443 ANKEF1Q9NU02 776 aa23.55■■□□□ 1.36
CPNE1-204ENST00000397443 TBC1D7Q9P0N9 293 aa23.55■■□□□ 1.36
CPNE1-204ENST00000397443 MAPK8IP1Q9UQF2 711 aa23.55■■□□□ 1.36
CPNE1-204ENST00000397443 LOXHD1Q8IVV2 1947 aa23.54■■□□□ 1.36
CPNE1-204ENST00000397443 GOLGA6L3A6NEY3 463 aa23.54■■□□□ 1.36
CPNE1-204ENST00000397443 LGR5O75473 907 aa23.54■■□□□ 1.36
CPNE1-204ENST00000397443 LGALS2P05162 132 aa23.54■■□□□ 1.36
CPNE1-204ENST00000397443 MMP3P08254 477 aa23.54■■□□□ 1.36
CPNE1-204ENST00000397443 CCND3P30281 292 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-204ENST00000397443 TRIML1Q8N9V2 468 aa23.54■■□□□ 1.36
CPNE1-204ENST00000397443 AFAP1L1Q8TED9 768 aa23.54■■□□□ 1.36
CPNE1-204ENST00000397443 XRCC6P12956 609 aaKnown RBP eCLIP23.53■■□□□ 1.36
CPNE1-204ENST00000397443 ZNF165P49910 485 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 CHMP4BP1P59074 171 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 SMARCAD1Q9H4L7 1026 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 TBCAO75347 108 aaKnown RBP23.53■■□□□ 1.36
CPNE1-204ENST00000397443 RHOBTB3O94955 611 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 HMGCRP04035 888 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 BEX3Q00994 111 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 COASYQ13057 564 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 KCNB1Q14721 858 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 KLHL10Q6JEL2 608 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 CCDC65Q8IXS2 484 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 AP5M1Q9H0R1 490 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 SLC39A2Q9NP94 309 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 CYP26B1Q9NR63 512 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 TRPC6Q9Y210 931 aa23.53■■□□□ 1.36
CPNE1-204ENST00000397443 EMSYQ7Z589 1322 aa23.52■■□□□ 1.36
CPNE1-204ENST00000397443 PVALEFA0A1B0GWK0 134 aa23.52■■□□□ 1.36
CPNE1-204ENST00000397443 HERC4Q5GLZ8 1057 aaPredicted RBP23.52■■□□□ 1.36
CPNE1-204ENST00000397443 CNNM4Q6P4Q7 775 aa23.52■■□□□ 1.36
CPNE1-204ENST00000397443 PTCH2Q9Y6C5 1203 aa23.52■■□□□ 1.36
CPNE1-204ENST00000397443 PPFIA4O75335 1185 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 MYCNP04198 464 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-204ENST00000397443 STK4Q13043 487 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 PLCB4Q15147 1175 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 DGKDQ16760 1214 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 ZNF658Q5TYW1 1059 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-204ENST00000397443 PLPPR4Q7Z2D5 763 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 CBX8Q9HC52 389 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 NRBP2Q9NSY0 501 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 NRBP1Q9UHY1 535 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 HIP1RO75146 1068 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 FAM13AO94988 1023 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 CD44P16070 742 aaKnown RBP23.51■■□□□ 1.35
CPNE1-204ENST00000397443 SOX10P56693 466 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 LUZP1Q86V48 1076 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 GPRC5CQ9NQ84 441 aa23.51■■□□□ 1.35
CPNE1-204ENST00000397443 BRCA2P51587 3418 aa23.5■■□□□ 1.35
CPNE1-204ENST00000397443 C6orf222P0C671 652 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-204ENST00000397443 SFR1Q86XK3 245 aa23.5■■□□□ 1.35
CPNE1-204ENST00000397443 GLIS3Q8NEA6 775 aa23.5■■□□□ 1.35
CPNE1-204ENST00000397443 FAM200AQ8TCP9 573 aa23.5■■□□□ 1.35
CPNE1-204ENST00000397443 NAT10Q9H0A0 1025 aaKnown RBP23.5■■□□□ 1.35
CPNE1-204ENST00000397443 RNPEPQ9H4A4 650 aa23.5■■□□□ 1.35
CPNE1-204ENST00000397443 ERAP1Q9NZ08 941 aa23.5■■□□□ 1.35
CPNE1-204ENST00000397443 SEPT4O43236 478 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 PGK1P00558 417 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 LRRC41Q15345 812 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 FAM102BQ5T8I3 360 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 MYCT1Q8N699 235 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 MLKLQ8NB16 471 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 ATP8B4Q8TF62 1192 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 PPP1R13LQ8WUF5 828 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 C16orf70Q9BSU1 422 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 KCND2Q9NZV8 630 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 ARID2Q68CP9 1835 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 MYADML2A6NDP7 307 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 A6NJR5 290 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 GUCY2CP25092 1073 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 POLGP54098 1239 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-204ENST00000397443 FAM26FQ5R3K3 315 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 AOPEPQ8N6M6 819 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 KIAA0895Q8NCT3 520 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 PXYLP1Q8TE99 480 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 TRAPPC12Q8WVT3 735 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 FAM167AQ96KS9 214 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 FGFBP2Q9BYJ0 223 aa23.49■■□□□ 1.35
CPNE1-204ENST00000397443 H3BRB1 525 aa23.48■■□□□ 1.35
CPNE1-204ENST00000397443 DUSP11O75319 330 aaKnown RBP23.48■■□□□ 1.35
CPNE1-204ENST00000397443 INHAP05111 366 aa23.48■■□□□ 1.35
CPNE1-204ENST00000397443 MYL3P08590 195 aa23.48■■□□□ 1.35
CPNE1-204ENST00000397443 RARBP10826 455 aa23.48■■□□□ 1.35
CPNE1-204ENST00000397443 GRK4P32298 578 aa23.48■■□□□ 1.35
CPNE1-204ENST00000397443 PRCPP42785 496 aa23.48■■□□□ 1.35
CPNE1-204ENST00000397443 STX17P56962 302 aa23.48■■□□□ 1.35
CPNE1-204ENST00000397443 L1TD1Q5T7N2 865 aaKnown RBP23.48■■□□□ 1.35
CPNE1-204ENST00000397443 BBXQ8WY36 941 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-204ENST00000397443 TUT1Q9H6E5 874 aaKnown RBP23.48■■□□□ 1.35
CPNE1-204ENST00000397443 ZNF215Q9UL58 517 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-204ENST00000397443 COL4A3BPQ9Y5P4 624 aa23.48■■□□□ 1.35
CPNE1-204ENST00000397443 MYH11P35749 1972 aa23.48■■□□□ 1.35
CPNE1-204ENST00000397443 FSD2A1L4K1 749 aa23.47■■□□□ 1.35
CPNE1-204ENST00000397443 FRMD3A2A2Y4 597 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms