RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CT47A1Q5JQC4 288 aaPredicted RBP30.53■■■□□ 2.48
CPNE1-203ENST00000397442 TRIM50Q86XT4 487 aa30.53■■■□□ 2.48
CPNE1-203ENST00000397442 SRRDQ9UH36 339 aa30.53■■■□□ 2.48
CPNE1-203ENST00000397442 MAPK7Q13164 816 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 PSMD2Q13200 908 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 NCAPHQ15003 741 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 PLPPR4Q7Z2D5 763 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 ADSSL1Q8N142 457 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 TRPV1Q8NER1 839 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 GTPBP4Q9BZE4 634 aaKnown RBP30.52■■■□□ 2.48
CPNE1-203ENST00000397442 AZI2Q9H6S1 392 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 SLC39A2Q9NP94 309 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 SEPT9Q9UHD8 586 aaPredicted RBP30.52■■■□□ 2.48
CPNE1-203ENST00000397442 MAPK8IP1Q9UQF2 711 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 ERCC5P28715 1186 aaPredicted RBP30.52■■■□□ 2.48
CPNE1-203ENST00000397442 UVSSAQ2YD98 709 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 COBLL1Q53SF7 1204 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 CEP170P1Q96L14 293 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 NRBP1Q9UHY1 535 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 ODF2LQ9ULJ1 636 aa30.52■■■□□ 2.48
CPNE1-203ENST00000397442 USO1O60763 962 aaKnown RBP30.51■■■□□ 2.47
CPNE1-203ENST00000397442 HOXD8P13378 290 aaPredicted RBP30.51■■■□□ 2.47
CPNE1-203ENST00000397442 ZNF131P52739 623 aa30.51■■■□□ 2.47
CPNE1-203ENST00000397442 HERC4Q5GLZ8 1057 aaPredicted RBP30.51■■■□□ 2.47
CPNE1-203ENST00000397442 DAW1Q8N136 415 aa30.51■■■□□ 2.47
CPNE1-203ENST00000397442 GLIS3Q8NEA6 775 aa30.51■■■□□ 2.47
CPNE1-203ENST00000397442 CCDC43Q96MW1 224 aaKnown RBP30.51■■■□□ 2.47
CPNE1-203ENST00000397442 NIFKQ9BYG3 293 aaKnown RBP30.51■■■□□ 2.47
CPNE1-203ENST00000397442 CYP26B1Q9NR63 512 aa30.51■■■□□ 2.47
CPNE1-203ENST00000397442 IKBKBO14920 756 aa30.5■■■□□ 2.47
CPNE1-203ENST00000397442 CYBAP13498 195 aa30.5■■■□□ 2.47
CPNE1-203ENST00000397442 FAM26FQ5R3K3 315 aa30.5■■■□□ 2.47
CPNE1-203ENST00000397442 MFSD14CQ5VZR4 134 aa30.5■■■□□ 2.47
CPNE1-203ENST00000397442 OR6J1Q8NGC5 347 aa30.5■■■□□ 2.47
CPNE1-203ENST00000397442 ZNF296Q8WUU4 475 aaPredicted RBP30.5■■■□□ 2.47
CPNE1-203ENST00000397442 GLG1Q92896 1179 aa30.5■■■□□ 2.47
CPNE1-203ENST00000397442 LENG1Q96BZ8 264 aaPredicted RBP30.5■■■□□ 2.47
CPNE1-203ENST00000397442 CEP89Q96ST8 783 aa30.5■■■□□ 2.47
CPNE1-203ENST00000397442 FGFBP2Q9BYJ0 223 aa30.5■■■□□ 2.47
CPNE1-203ENST00000397442 FKTNO75072 461 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 HIP1RO75146 1068 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 TBCAO75347 108 aaKnown RBP30.49■■■□□ 2.47
CPNE1-203ENST00000397442 L1TD1Q5T7N2 865 aaKnown RBP30.49■■■□□ 2.47
CPNE1-203ENST00000397442 KLHL10Q6JEL2 608 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 SFR1Q86XK3 245 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 ZHX3Q9H4I2 956 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 SMARCAD1Q9H4L7 1026 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 PDLIM7Q9NR12 457 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 COL4A3BPQ9Y5P4 624 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 SFI1A8K8P3 1242 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 LGALS2P05162 132 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 HOXD10P28358 340 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 C1QTNF8P60827 252 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 TRMT44Q8IYL2 757 aaKnown RBP30.49■■■□□ 2.47
CPNE1-203ENST00000397442 ERO1AQ96HE7 468 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 TBC1D7Q9P0N9 293 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 FAM184BQ9ULE4 1060 aa30.49■■■□□ 2.47
CPNE1-203ENST00000397442 BECN2A8MW95 431 aa30.48■■■□□ 2.47
CPNE1-203ENST00000397442 PPFIA4O75335 1185 aa30.48■■■□□ 2.47
CPNE1-203ENST00000397442 GNRH1P01148 92 aa30.48■■■□□ 2.47
CPNE1-203ENST00000397442 MMP3P08254 477 aa30.48■■■□□ 2.47
CPNE1-203ENST00000397442 MYL5Q02045 173 aa30.48■■■□□ 2.47
CPNE1-203ENST00000397442 TRIM32Q13049 653 aa30.48■■■□□ 2.47
CPNE1-203ENST00000397442 TARBP2Q15633 366 aaKnown RBP30.48■■■□□ 2.47
CPNE1-203ENST00000397442 ENOX1Q8TC92 643 aaKnown RBP30.48■■■□□ 2.47
CPNE1-203ENST00000397442 MYH11P35749 1972 aa30.48■■■□□ 2.47
CPNE1-203ENST00000397442 FAM13AO94988 1023 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 GAP43P17677 238 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 SLC26A2P50443 739 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 MAP2K1Q02750 393 aaPredicted RBP30.47■■■□□ 2.47
CPNE1-203ENST00000397442 PLCB4Q15147 1175 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 MTERF2Q49AM1 385 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 FAM167AQ96KS9 214 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 TIPINQ9BVW5 301 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 HSD3B7Q9H2F3 369 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 NRBP2Q9NSY0 501 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 CTNND2Q9UQB3 1225 aa30.47■■■□□ 2.47
CPNE1-203ENST00000397442 DYNC1LI2O43237 492 aaPredicted RBP30.46■■■□□ 2.47
CPNE1-203ENST00000397442 MARK3P27448 753 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 MAEAQ7L5Y9 396 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 TLK2Q86UE8 772 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 ATP8B4Q8TF62 1192 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 BBXQ8WY36 941 aaPredicted RBP30.46■■■□□ 2.47
CPNE1-203ENST00000397442 C16orf70Q9BSU1 422 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 PARVGQ9HBI0 331 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 OLFML3Q9NRN5 406 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 A6NJR5 290 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 DGAT1O75907 488 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 ELNP15502 786 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 PAK1Q13153 545 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 LRRC41Q15345 812 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 NELFBQ8WX92 580 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 FIZ1Q96SL8 496 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 XPNPEP1Q9NQW7 623 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 RWDD2AQ9UIY3 292 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 Q9Y3F1 56 aa30.46■■■□□ 2.47
CPNE1-203ENST00000397442 SMTNL1A8MU46 457 aa30.45■■■□□ 2.46
CPNE1-203ENST00000397442 AKR1A1P14550 325 aa30.45■■■□□ 2.46
CPNE1-203ENST00000397442 STX17P56962 302 aa30.45■■■□□ 2.46
CPNE1-203ENST00000397442 CACNB2Q08289 660 aaPredicted RBP30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms