RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TBC1D8BQ0IIM8 1120 aa28.42■■■□□ 2.14
TSPAN4-207ENST00000397411 NEK9Q8TD19 979 aa28.42■■■□□ 2.14
TSPAN4-207ENST00000397411 SUGCTQ9HAC7 445 aa28.42■■■□□ 2.14
TSPAN4-207ENST00000397411 POTEMA6NI47 508 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 NBNO60934 754 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 SLITRK3O94933 977 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 MRPS6P82932 125 aaKnown RBP28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 TMEM62Q0P6H9 643 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 FAM26DQ5JW98 314 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 EFCAB12Q6NXP0 572 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 TRAF7Q6Q0C0 670 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 C4orf19Q8IY42 314 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 C4orf32Q8N8J7 132 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 HERVK_113Q902F9 699 aa28.41■■■□□ 2.14
TSPAN4-207ENST00000397411 C22orf31O95567 290 aa28.4■■■□□ 2.14
TSPAN4-207ENST00000397411 DTHD1Q6ZMT9 781 aa28.4■■■□□ 2.14
TSPAN4-207ENST00000397411 CDY2AQ9Y6F7 541 aa28.4■■■□□ 2.14
TSPAN4-207ENST00000397411 TMEM150BA6NC51 233 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 CHRNA1P02708 482 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 BECN1Q14457 450 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 LRIT3Q3SXY7 679 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 CNKSR3Q6P9H4 555 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 CEP170P1Q96L14 293 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 CCDC43Q96MW1 224 aaKnown RBP28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 MAP7D2Q96T17 732 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 SH2D3AQ9BRG2 576 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 LRWD1Q9UFC0 647 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 TRPV2Q9Y5S1 764 aa28.39■■■□□ 2.14
TSPAN4-207ENST00000397411 STBD1O95210 358 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 CXCL10P02778 98 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 PDIA4P13667 645 aaKnown RBP28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 YWHABP31946 246 aaKnown RBP28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 FXR2P51116 673 aaKnown RBP eCLIP28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 GPNMBQ14956 572 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 PLA2G4FQ68DD2 849 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 ANO5Q75V66 913 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 KIAA0319LQ8IZA0 1049 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 SEPT8Q92599 483 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 HSD17B14Q9BPX1 270 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 MTMR6Q9Y217 621 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 AKT3Q9Y243 479 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 GINS2Q9Y248 185 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 STK24Q9Y6E0 443 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 SLC4A7Q9Y6M7 1214 aa28.38■■■□□ 2.13
TSPAN4-207ENST00000397411 PRPHP41219 470 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 DNM2P50570 870 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 IKBKEQ14164 716 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 PDIA5Q14554 519 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 MBTPS1Q14703 1052 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 TARBP2Q15633 366 aaKnown RBP28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 XKR9Q5GH70 373 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 EXOC8Q8IYI6 725 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 JPH2Q9BR39 696 aaPredicted RBP28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 CELF4Q9BZC1 486 aaKnown RBP28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 ZSCAN16Q9H4T2 348 aaPredicted RBP28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 TUFT1Q9NNX1 390 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 CYP26B1Q9NR63 512 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 WRAP73Q9P2S5 460 aaPredicted RBP28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 TET1Q8NFU7 2136 aa28.37■■■□□ 2.13
TSPAN4-207ENST00000397411 BMP15O95972 392 aa28.36■■■□□ 2.13
TSPAN4-207ENST00000397411 CLCN3P51790 818 aa28.36■■■□□ 2.13
TSPAN4-207ENST00000397411 NPEPPSP55786 919 aa28.36■■■□□ 2.13
TSPAN4-207ENST00000397411 LRRC71Q8N4P6 559 aa28.36■■■□□ 2.13
TSPAN4-207ENST00000397411 VWCEQ96DN2 955 aa28.36■■■□□ 2.13
TSPAN4-207ENST00000397411 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 GHRP10912 638 aa28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 CCT6AP40227 531 aaKnown RBP28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 KCNJ6P48051 423 aa28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 ATP2C1P98194 919 aaPredicted RBP28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 MGAT3Q09327 533 aa28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 RESTQ13127 1097 aa28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 HAUS3Q68CZ6 603 aa28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 DBF4BQ8NFT6 615 aa28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 POLR3CQ9BUI4 534 aaPredicted RBP28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 CXXC1Q9P0U4 656 aaPredicted RBP28.35■■■□□ 2.13
TSPAN4-207ENST00000397411 BAIAP3O94812 1187 aa28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 POLGP54098 1239 aaPredicted RBP28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 FOXD4L5Q5VV16 416 aaPredicted RBP28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 CATSPER3Q86XQ3 398 aa28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 FOXD4L4Q8WXT5 416 aaPredicted RBP28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 SLC7A3Q8WY07 619 aa28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 SCLT1Q96NL6 688 aa28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 PPP1R16BQ96T49 567 aa28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 ANKEF1Q9NU02 776 aa28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 PPME1Q9Y570 386 aa28.34■■■□□ 2.13
TSPAN4-207ENST00000397411 ABHD14A-ACY1A0A1B0GW23 586 aa28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 ZBTB39O15060 712 aa28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 EFCAB14O75071 495 aa28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 LYPLA2O95372 231 aa28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 VTNP04004 478 aa28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 SF3A1Q15459 793 aaKnown RBP28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 PLEKHG4Q58EX7 1191 aa28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 RASIP1Q5U651 963 aa28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 KRT79Q5XKE5 535 aa28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 NACC1Q96RE7 527 aa28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 IFIH1Q9BYX4 1025 aaKnown RBP28.33■■■□□ 2.13
TSPAN4-207ENST00000397411 VWA3AA6NCI4 1184 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 MAFO75444 373 aaPredicted RBP28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 MED24O75448 989 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms