RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 AFAP1L1Q8TED9 768 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 LARP4BQ92615 738 aaKnown RBP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 RAD54LQ92698 747 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 ATP6V0A1Q93050 837 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 ZMYND15Q9H091 742 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 MAFBQ9Y5Q3 323 aaPredicted RBP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 EMSYQ7Z589 1322 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 USP27XA6NNY8 438 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 IKBKBO14920 756 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 DUSP11O75319 330 aaKnown RBP16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 HSPA1AP0DMV8 641 aaKnown RBP16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 HSPA1BP0DMV9 641 aaKnown RBP16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 NCBP1Q09161 790 aaKnown RBP16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 NCAPHQ15003 741 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 SWSAP1Q6NVH7 229 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 TLK2Q86UE8 772 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 CCDC34Q96HJ3 373 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 PCYT2Q99447 389 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 KBTBD4Q9NVX7 518 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 GABBR1Q9UBS5 961 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 MDM2Q00987 491 aaPredicted RBP16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 CCAR2Q8N163 923 aaKnown RBP16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 CCDC150Q8NCX0 1101 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 AFG1LQ8WV93 481 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 NACC1Q96RE7 527 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 ZNF302Q9NR11 478 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 DNM3Q9UQ16 869 aa16.49■□□□□ 0.23
TM9SF1-202ENST00000396854 E9PMD0 336 aa16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 INHAP05111 366 aa16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 CCND3P30281 292 aaPredicted RBP16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 PSMC6P62333 389 aa16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 LENG1Q96BZ8 264 aaPredicted RBP16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 PAGE5Q96GU1 130 aa16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 MTRQ99707 1265 aa16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 ARID3AQ99856 593 aa16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 XPO4Q9C0E2 1151 aaKnown RBP16.48■□□□□ 0.23
TM9SF1-202ENST00000396854 A6NJR5 290 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 BACH1O14867 736 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 ZNF862O60290 1169 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 PPFIA4O75335 1185 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 EYA4O95677 639 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 MMP3P08254 477 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 NKX3-2P78367 333 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 PTPN14Q15678 1187 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 FAM160B1Q5W0V3 765 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 IFNKQ9P0W0 207 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 BIN1O00499 593 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 DYNC1LI2O43237 492 aaPredicted RBP16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 KCNJ6P48051 423 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 STAT5BP51692 787 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 SLC12A3P55017 1021 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 PNOCQ13519 176 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 POSTNQ15063 836 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 SV2BQ7L1I2 683 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 PLPPR4Q7Z2D5 763 aa16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 SYT2Q8N9I0 419 aaPredicted RBP16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 UPF3AQ9H1J1 476 aaKnown RBP16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 DBR1Q9UK59 544 aaKnown RBP16.47■□□□□ 0.23
TM9SF1-202ENST00000396854 KIF2AO00139 706 aaPredicted RBP16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 STBD1O95210 358 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 SMC2O95347 1197 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 MYL1P05976 194 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 PLA2G4BP0C869 781 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 CNGA1P29973 690 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 YWHABP31946 246 aaKnown RBP16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 SLC26A2P50443 739 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 GJA9P57773 515 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 PRKCEQ02156 737 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 MCM6Q14566 821 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 NT5DC1Q5TFE4 455 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 PIGOQ8TEQ8 1089 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 AP5M1Q9H0R1 490 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 SMARCAD1Q9H4L7 1026 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 AZI2Q9H6S1 392 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 ANKEF1Q9NU02 776 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 CENPFP49454 3210 aa16.46■□□□□ 0.23
TM9SF1-202ENST00000396854 LGALS2P05162 132 aa16.46■□□□□ 0.22
TM9SF1-202ENST00000396854 RARBP10826 455 aa16.46■□□□□ 0.22
TM9SF1-202ENST00000396854 ATP4AP20648 1035 aa16.46■□□□□ 0.22
TM9SF1-202ENST00000396854 CPT1AP50416 773 aa16.46■□□□□ 0.22
TM9SF1-202ENST00000396854 LBX1P52954 281 aa16.46■□□□□ 0.22
TM9SF1-202ENST00000396854 DGKDQ16760 1214 aa16.46■□□□□ 0.22
TM9SF1-202ENST00000396854 CTU1Q7Z7A3 348 aaKnown RBP16.46■□□□□ 0.22
TM9SF1-202ENST00000396854 BHMT2Q9H2M3 363 aa16.46■□□□□ 0.22
TM9SF1-202ENST00000396854 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 ZBTB39O15060 712 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 AFMP43652 599 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 AMPD3Q01432 767 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 XKR3Q5GH77 459 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 ANO5Q75V66 913 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 TMC6Q7Z403 805 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 GRAMD1CQ8IYS0 662 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 LRRC27Q9C0I9 530 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 HMX1Q9NP08 348 aaPredicted RBP16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 DDX20Q9UHI6 824 aaKnown RBP16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 MYH11P35749 1972 aa16.45■□□□□ 0.22
TM9SF1-202ENST00000396854 GTPBP6O43824 516 aaPredicted RBP16.44■□□□□ 0.22
TM9SF1-202ENST00000396854 MSCO60682 206 aa16.44■□□□□ 0.22
TM9SF1-202ENST00000396854 OATP04181 439 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms