RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 C16orf86Q6ZW13 317 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 PNMA8AQ86V59 439 aaPredicted RBP26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 RIC8AQ9NPQ8 531 aa26.12■■□□□ 1.77
CSNK1E-203ENST00000396832 F8VZ95 297 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 TMEM119Q4V9L6 283 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 ANKS4BQ8N8V4 417 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 SCFD1Q8WVM8 642 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 FAM129AQ9BZQ8 928 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 DPH5Q9H2P9 285 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 EBF2Q9HAK2 575 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 PCDHA12Q9UN75 941 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 POTEFA5A3E0 1075 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 KRIT1O00522 736 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 POTEIP0CG38 1075 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 POTEGQ6S5H5 508 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 POTEEQ6S8J3 1075 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 KCTD1Q719H9 257 aa26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 CALR3Q96L12 384 aaKnown RBP26.11■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L15C9J2P7 530 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L13C9JLJ4 530 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L11C9JVI0 530 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L18D6R9N7 530 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L22D6RA61 530 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L17D6RBQ6 530 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L19D6RCP7 530 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L20D6RJB6 530 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 PGRMC1O00264 195 aaKnown RBP26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 NR2F2P24468 414 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L24Q0WX57 530 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 USP17L6PQ6QN14 398 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 PNMA2Q9UL42 364 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 NOC2LQ9Y3T9 749 aaKnown RBP26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 DDX60LQ5H9U9 1706 aaKnown RBP26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 MYH7BA7E2Y1 1941 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 COPB2P35606 906 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 DPP8Q6V1X1 898 aaPredicted RBP26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 TRIM59Q8IWR1 403 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 IKZF4Q9H2S9 585 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 L3MBTL1Q9Y468 752 aa26.1■■□□□ 1.77
CSNK1E-203ENST00000396832 AKR1B1P15121 316 aa26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 TM4SF1P30408 202 aa26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 FAM182BQ5T319 152 aa26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 TBC1D1Q86TI0 1168 aaPredicted RBP26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 TLCD1Q96CP7 247 aa26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.09■■□□□ 1.771e-7■■■□□ 19
CSNK1E-203ENST00000396832 AJAP1Q9UKB5 411 aaPredicted RBP26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 SLC12A4Q9UP95 1085 aa26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 PLA2G4BP0C869 781 aa26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 CCNHP51946 323 aaPredicted RBP26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 CRELD2Q6UXH1 353 aaPredicted RBP26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 METTL13Q8N6R0 699 aa26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 CENPTQ96BT3 561 aa26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 ZNF317Q96PQ6 595 aaPredicted RBP26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 EMILIN3Q9NT22 766 aa26.09■■□□□ 1.77
CSNK1E-203ENST00000396832 TULP1O00294 542 aaPredicted RBP26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 TTI1O43156 1089 aa26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 ANP32DO95626 131 aa26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 DHX37Q8IY37 1157 aaKnown RBP26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 GANQ9H2C0 597 aa26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 MAST2Q6P0Q8 1798 aa26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 CAND2O75155 1236 aa26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 GSTO1P78417 241 aa26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 ZNF287Q9HBT7 754 aa26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 BMP2KQ9NSY1 1161 aaPredicted RBP26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 HDAC9Q9UKV0 1011 aa26.08■■□□□ 1.77
CSNK1E-203ENST00000396832 CHN1P15882 459 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 TPTE2Q6XPS3 522 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 ADGRF4Q8IZF3 695 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 PROM2Q8N271 834 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 ATP8A1Q9Y2Q0 1164 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 SPATA31A1Q5TZJ5 1347 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 IRS2Q9Y4H2 1338 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 GSTA1P08263 222 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 TAL1P17542 331 aaPredicted RBP26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 IRX1P78414 480 aaPredicted RBP26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 SLC10A5Q5PT55 438 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 C8orf37Q96NL8 207 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 RIOX1Q9H6W3 641 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 C15orf41Q9Y2V0 281 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 MMEP08473 750 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 ZKSCAN8Q15776 578 aaPredicted RBP26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 FAM133BQ5BKY9 247 aaKnown RBP26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 RBM46Q8TBY0 533 aaKnown RBP26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 AIPL1Q9NZN9 384 aa26.07■■□□□ 1.76
CSNK1E-203ENST00000396832 USP17L10C9JJH3 530 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 CCDC188H7C350 402 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 RFC4P35249 363 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 PABPC4Q13310 644 aaKnown RBP eCLIP26.06■■□□□ 1.767e-12■■■■■ 59.9
CSNK1E-203ENST00000396832 PRPF4BQ13523 1007 aaKnown RBP26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 RIPK1Q13546 671 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 CCDC26Q8TAB7 109 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 NYXQ9GZU5 481 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 BATF3Q9NR55 127 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 MPHOSPH10O00566 681 aaKnown RBP26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 ASAP2O43150 1006 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 PSMC6P62333 389 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 PSMD2Q13200 908 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 MFSD14BQ5SR56 506 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 PIGWQ7Z7B1 504 aa26.06■■□□□ 1.76
CSNK1E-203ENST00000396832 CCDC65Q8IXS2 484 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms