RNA–Protein interactions for RNA: ENST00000396185.7

CTNNB1-203, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-203ENST00000396185 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 METTL14Q9HCE5 456 aaKnown RBP13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 DDX3XO00571 662 aaKnown RBP eCLIP13.12□□□□□ -0.313e-18■■■■■ 27.3
CTNNB1-203ENST00000396185 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 CHRM1P11229 460 aaPredicted RBP13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 BTDP43251 543 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 GUCY2FP51841 1108 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 TLDC1Q6P9B6 456 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 RAPGEF5Q92565 580 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 LENG9Q96B70 501 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 SEC16BQ96JE7 1060 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 DHX36Q9H2U1 1008 aaKnown RBP13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 PACSIN2Q9UNF0 486 aaPredicted RBP13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 SUGT1Q9Y2Z0 365 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 UBE4BO95155 1302 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 FAM187AA6NFU0 413 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 EIF3DO15371 548 aaKnown RBP eCLIP13.12□□□□□ -0.316e-8■□□□□ 8.6
CTNNB1-203ENST00000396185 FLOT1O75955 427 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 ADAM9Q13443 819 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 SPRED3Q2MJR0 410 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 SLFN12Q8IYM2 578 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 CUL5Q93034 780 aa13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 AJAP1Q9UKB5 411 aaPredicted RBP13.12□□□□□ -0.31
CTNNB1-203ENST00000396185 KCNK3O14649 394 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 SPATA31C1P0DKV0 1188 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 ALADP13716 330 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 ALKBH5Q6P6C2 394 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 FMNL3Q8IVF7 1028 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 SGSM3Q96HU1 749 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 MKNK1Q9BUB5 465 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 ZBTB5O15062 677 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 CETN3O15182 167 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 MTA2O94776 668 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 RPA1P27694 616 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 CIITAP33076 1130 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 LMNB2Q03252 620 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 RAPGEF1Q13905 1077 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 DHX34Q14147 1143 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 CYP1B1Q16678 543 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 GPATCH4Q5T3I0 446 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 TAF4BQ92750 862 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 PCDHA12Q9UN75 941 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 CTNNA1P35221 906 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 CASP5P51878 434 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 PLS1Q14651 629 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 ZDHHC24Q6UX98 284 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 LNX1Q8TBB1 728 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 MKL1Q969V6 931 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 PSMD1Q99460 953 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 PCYOX1Q9UHG3 505 aa13.11□□□□□ -0.31
CTNNB1-203ENST00000396185 ZNFX1Q9P2E3 1918 aaKnown RBP13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 KAT6BQ8WYB5 2073 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 GOLGA6L10A6NI86 522 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 KIF1CO43896 1103 aaKnown RBP13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 FERP16591 822 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 SLC9A1P19634 815 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 GBP1P32455 592 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 E7EVH7 732 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 ZPR1O75312 459 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 MED24O75448 989 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 CTNNA2P26232 953 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 PTGIRP43119 386 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 SCTRP47872 440 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 C11orf63Q6NUN7 778 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 CYB5D1Q6P9G0 228 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 TPTE2Q6XPS3 522 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 SLCO2A1Q92959 643 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 COA7Q96BR5 231 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 CXorf56Q9H5V9 222 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 DMAC2Q9NW81 257 aa13.1□□□□□ -0.31
CTNNB1-203ENST00000396185 AKAP3O75969 853 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 VCAM1P19320 739 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 RFX1P22670 979 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 CROCCP2Q86T23 111 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 POLR3CQ9BUI4 534 aaPredicted RBP13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 E9PMD0 336 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 CALUO43852 315 aaPredicted RBP13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 TTLL1O95922 423 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 MUTP22033 750 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 NR2F2P24468 414 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 KIF22Q14807 665 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 EXOC3L4Q17RC7 722 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 RFFLQ8WZ73 363 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
CTNNB1-203ENST00000396185 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms