RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 DPCR1Q3MIW9 517 aa15.19■□□□□ 0.02
VAPB-202ENST00000395802 ANO5Q75V66 913 aa15.19■□□□□ 0.02
VAPB-202ENST00000395802 SLC17A8Q8NDX2 589 aa15.19■□□□□ 0.02
VAPB-202ENST00000395802 MCPH1Q8NEM0 835 aa15.19■□□□□ 0.02
VAPB-202ENST00000395802 DNAJC19Q96DA6 116 aa15.19■□□□□ 0.02
VAPB-202ENST00000395802 DRC1Q96MC2 740 aa15.19■□□□□ 0.02
VAPB-202ENST00000395802 NIFKQ9BYG3 293 aaKnown RBP15.19■□□□□ 0.02
VAPB-202ENST00000395802 SEL1LQ9UBV2 794 aa15.19■□□□□ 0.02
VAPB-202ENST00000395802 GNEQ9Y223 722 aaKnown RBP15.19■□□□□ 0.02
VAPB-202ENST00000395802 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
VAPB-202ENST00000395802 FRMD3A2A2Y4 597 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 ADCY3O60266 1144 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 DUSP11O75319 330 aaKnown RBP15.18■□□□□ 0.02
VAPB-202ENST00000395802 FAM13AO94988 1023 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 GIT2Q14161 759 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 UVSSAQ2YD98 709 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 ARSHQ5FYA8 562 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 HERC4Q5GLZ8 1057 aaPredicted RBP15.18■□□□□ 0.02
VAPB-202ENST00000395802 PRAMEF19Q5SWL8 479 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 UTP14CQ5TAP6 766 aaKnown RBP15.18■□□□□ 0.02
VAPB-202ENST00000395802 ISM2Q6H9L7 571 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 TLK2Q86UE8 772 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 SLAIN1Q8ND83 568 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 AFG1LQ8WV93 481 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 JPH2Q9BR39 696 aaPredicted RBP15.18■□□□□ 0.02
VAPB-202ENST00000395802 C17orf75Q9HAS0 396 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 PARVGQ9HBI0 331 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 CYP26B1Q9NR63 512 aa15.18■□□□□ 0.02
VAPB-202ENST00000395802 LARSQ9P2J5 1176 aaKnown RBP15.18■□□□□ 0.02
VAPB-202ENST00000395802 MYH9P35579 1960 aaKnown RBP15.18■□□□□ 0.02
VAPB-202ENST00000395802 A6NJR5 290 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 GOLGA6L19H0YKK7 550 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 SEPT4O43236 478 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 DYNC1LI2O43237 492 aaPredicted RBP15.17■□□□□ 0.02
VAPB-202ENST00000395802 ZNF862O60290 1169 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 CYBAP13498 195 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 RFC5P40937 340 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 COBLL1Q53SF7 1204 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 STXBP4Q6ZWJ1 553 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 ATP8B4Q8TF62 1192 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 SLC7A3Q8WY07 619 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 REEP2Q9BRK0 252 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 RUSC1Q9BVN2 902 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 DOCK5Q9H7D0 1870 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 A0A087WWV3 80 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 PSMA7O14818 248 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 ZBTB39O15060 712 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 GAS2O43903 313 aaKnown RBP15.17■□□□□ 0.02
VAPB-202ENST00000395802 HBP1O60381 514 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 KPNA6O60684 536 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 MMP3P08254 477 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 RARBP10826 455 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 HOXD8P13378 290 aaPredicted RBP15.17■□□□□ 0.02
VAPB-202ENST00000395802 COASYQ13057 564 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 C11orf57Q6ZUT1 292 aaPredicted RBP15.17■□□□□ 0.02
VAPB-202ENST00000395802 ANP32BQ92688 251 aaKnown RBP15.17■□□□□ 0.02
VAPB-202ENST00000395802 KIFAP3Q92845 792 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 ZHX3Q9H4I2 956 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 ATP6V0A4Q9HBG4 840 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 WBP1LQ9NX94 342 aa15.17■□□□□ 0.02
VAPB-202ENST00000395802 ZEB2O60315 1214 aa15.16■□□□□ 0.02
VAPB-202ENST00000395802 MSCO60682 206 aa15.16■□□□□ 0.02
VAPB-202ENST00000395802 LGALS2P05162 132 aa15.16■□□□□ 0.02
VAPB-202ENST00000395802 CNGA1P29973 690 aa15.16■□□□□ 0.02
VAPB-202ENST00000395802 ABCD1P33897 745 aa15.16■□□□□ 0.02
VAPB-202ENST00000395802 POLGP54098 1239 aaPredicted RBP15.16■□□□□ 0.02
VAPB-202ENST00000395802 FAM26FQ5R3K3 315 aa15.16■□□□□ 0.02
VAPB-202ENST00000395802 TRMT1LQ7Z2T5 733 aaKnown RBP15.16■□□□□ 0.02
VAPB-202ENST00000395802 DHTKD1Q96HY7 919 aaPredicted RBP15.16■□□□□ 0.02
VAPB-202ENST00000395802 PCYT2Q99447 389 aa15.16■□□□□ 0.02
VAPB-202ENST00000395802 CBX8Q9HC52 389 aa15.16■□□□□ 0.02
VAPB-202ENST00000395802 OLFML3Q9NRN5 406 aa15.16■□□□□ 0.02
VAPB-202ENST00000395802 IKBKBO14920 756 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 USO1O60763 962 aaKnown RBP15.15■□□□□ 0.02
VAPB-202ENST00000395802 STBD1O95210 358 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 BMP6P22004 513 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 SCP2P22307 547 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 ZNF131P52739 623 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 EHHADHQ08426 723 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 RAD51AP2Q09MP3 1159 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 MYCT1Q8N699 235 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 KATNAL1Q9BW62 490 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 TRPC6Q9Y210 931 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 BICDL2A1A5D9 508 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 H3BRB1 525 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 MAPTP10636 758 aaKnown RBP15.15■□□□□ 0.02
VAPB-202ENST00000395802 PRKAR2AP13861 404 aaKnown RBP15.15■□□□□ 0.02
VAPB-202ENST00000395802 ATP4AP20648 1035 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 SMTNP53814 917 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 RTP1P59025 263 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 CACNB2Q08289 660 aaPredicted RBP15.15■□□□□ 0.02
VAPB-202ENST00000395802 ALCAMQ13740 583 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 MTERF2Q49AM1 385 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 ZNF484Q5JVG2 852 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 TMEM63BQ5T3F8 832 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 GJC2Q5T442 439 aaPredicted RBP15.15■□□□□ 0.02
VAPB-202ENST00000395802 PLA2G4FQ68DD2 849 aa15.15■□□□□ 0.02
VAPB-202ENST00000395802 TUT1Q9H6E5 874 aaKnown RBP15.15■□□□□ 0.02
VAPB-202ENST00000395802 MRPL44Q9H9J2 332 aaKnown RBP15.15■□□□□ 0.02
VAPB-202ENST00000395802 TELO2Q9Y4R8 837 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms